Leifsonia xyli subsp. xyli CTCB07: Lxx09470
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Entry
Lxx09470 CDS
T00190
Symbol
csd
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
lxx
Leifsonia xyli subsp. xyli CTCB07
Pathway
lxx00450
Selenocompound metabolism
lxx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lxx00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Lxx09470 (csd)
Enzymes [BR:
lxx01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
Lxx09470 (csd)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
Lxx09470 (csd)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
SelA
Motif
Other DBs
NCBI-ProteinID:
AAT88829
UniProt:
Q6AFL6
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All DBs
Position
971729..973009
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AA seq
426 aa
AA seq
DB search
MRTDTLDPLRIRADFPAFDREVNGHPFVYLDSGATAQKPRQVLEAERTFAERHTSAVHRG
AHTVAGEATEMFEEARARVTGFVGARPEELVWTAKATEGINLLAYGMSNASLGRGGPAAG
RFRLGPGDDLVVTEAEHHANLIPWQELAARTGATLRVIGLTDDGRLRLDQAAELIGPRTR
VVAFAHVSNVLGTVAPVAELVALAHEHGALAVLDACQSVPHFAVDFPALGVDFAVFSGHK
MLGPTGIGALYGRQELLDALPPFLTGGSMITTVTLDGAEYLPAPQRFEAGTQPVSQAVGL
ASAVDYLGTVGMAAIASHEEALGARLLAGLGALDGVRVLGPGPGTPRVGLASFVVDGIHA
HDVGQFLDDRGIAVRVGHHCAQPLHRRFAVTASTRISTYLYNTADEVDAAVAAVADARAF
FGVIES
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaccgacactctcgacccgctacggatccgcgcggacttccctgccttcgaccgc
gaggtgaacgggcatcctttcgtctacctagactccggtgccacggcgcagaagccgcgg
caggtgctggaggccgaacgcaccttcgccgaaaggcacacctcggccgtgcatcgcggc
gcccacaccgttgcgggcgaggcgaccgagatgttcgaggaggcccgcgcgcgcgttacc
ggcttcgtcggggcgcgcccggaggaactcgtctggaccgccaaagccactgagggcatc
aacctcctcgcgtacgggatgtcgaacgcctctctcgggcggggcggtcccgccgccggg
cgcttccgtctcggtccgggcgacgacctggtcgtgaccgaggccgagcaccacgccaac
ctcatcccttggcaggagctcgccgcccgcacgggcgcgaccctccgcgtcatcggcctc
accgacgacggccgcctccgcctcgatcaggccgccgagctgatcggtccacgcacccgc
gtcgtcgctttcgcccacgtctcgaacgtcctcggcacggtcgcgccggtggccgagctg
gtcgctctcgcccacgagcacggagcgctcgctgtcctggacgcctgccagtccgttccg
cacttcgccgtcgactttccggccctgggggtcgatttcgccgtcttctctggccacaag
atgctgggccccaccgggatcggcgcgctctacgggcgacaggagctcctcgacgccctc
ccgccgttcctcaccgggggctccatgatcacgaccgtgacactggacggggccgagtac
cttcccgcgccgcagcgcttcgaggcgggcacgcagcccgtctcccaggcggtcggcctc
gccagcgccgtcgactacctcggcacggtcgggatggcggccatagcctcccacgaagaa
gcgctcggagcccgcctgctcgccgggctcggggccctcgacggcgtgcgcgtcctcggt
cccggtccggggaccccccgcgtcgggctcgcgagtttcgtcgtggacggcatccacgcg
cacgatgtcgggcagttcctcgacgaccgaggcatcgcggtgcgcgtcggccatcactgc
gcgcagcctctgcaccgccggttcgccgtcaccgcctccacccgcatcagcacctacctt
tacaacacggcggatgaggtggacgccgcggtcgctgccgtcgccgacgcccgtgctttc
ttcggagtgatcgagtcatga
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