Leifsonia xyli subsp. xyli CTCB07: Lxx11470
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Entry
Lxx11470 CDS
T00190
Symbol
uvrA
Name
(GenBank) UvrA-like protein
KO
K03701
excinuclease ABC subunit A
Organism
lxx
Leifsonia xyli subsp. xyli CTCB07
Pathway
lxx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lxx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Lxx11470 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lxx03400
]
Lxx11470 (uvrA)
DNA repair and recombination proteins [BR:
lxx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Lxx11470 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Lxx11470 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_16
AAA_21
RsgA_GTPase
APS_kinase
DnaJ_CXXCXGXG
NACHT
IIGP
ExoX-like_C
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AAT88995
UniProt:
Q6AF50
LinkDB
All DBs
Position
1180186..1183176
Genome browser
AA seq
996 aa
AA seq
DB search
MSGSSSCAWVRAGRTKVAAPGNKRRMERVSTQGTGNIGKVTGSHLSVRGARVHNLNNVDL
EIPRDSMVVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQVDRPDVDFIEGL
SPAVSIDQKSTNRNPRSTVGTITEIYDYMRLLWARIGVPHCPVCGERIQRQTVQQIADQL
MELEPGTRYMVVSPVVSQKKGEFVDLFKELAASGYSRALVDGEPVQLSDPPALKKQYKHD
ISVVVDRLVAGPDILGRLTDSLETALRLTEGVVQVNFVDREGPEAWQSFSEKLSCPNGHP
LQLTEIEPRTFSFNAPFGACPECSGLGIRMSVDDDLLLGDENLSIAEGVIVPWTTQGKGL
FSYYEKLLDGLARDLEFSLTTPWRKLSQSVREAVLHGDNFDVKVRWKNRYGREMSYTSGF
EGVVPYIERQYLQAETDTQRARWAEYLREVPCPVCKGKRLKPEVLAVLIHGSSIADAAEL
SLGDARGFMEKLRLTEREQKIGAQVLREIKIRLDFLIQVGLSYLDLARAAATLSGGEAQR
IRLATQIGSGLTGVLYVLDEPSIGLHQRDNRRLIDTLVALRDLGNTLIVVEHDEDTIRTA
DWIVDIGPGAGVNGGHVVHSGSYSDLVENTASLTGDYLSGRREIPVPPKRRTIDKKRMLK
VVDATANNLQKVTVDFPLGVFVAVTGVSGSGKSSLVNDILYRVLANKLNGARKLPGKHRT
VTGLDNLDKVVHVDQAPIGRTPRSNPATYTGVFDRIRTLFAETPEAKMRGYLPGRFSFNV
KGGRCEACSGDGTIKIEMNFLPDVYVACEVCGGARYNRDTLSVHYKGKSIAEVLDMPISE
AAEFFEPISAIHRYLKTLVEVGLGYVRLGQSATTLSGGEAQRVKLATELQRRSNGRSVYV
LDEPTTGLHFEDVRKLLLVLNGLLDKGNTVITIEHNLDVIKSADWIIDMGPEGGAGGGTV
VATGTPEQVADAPGSHTGHFLKEILRGEASAARGAA
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgggttcgagcagctgtgcgtgggtgcgcgctgggcgaacaaaggtcgcggcccca
gggaataagcggagaatggaacgagtgagcactcagggtaccggcaacatcggcaaggtc
acgggttcgcatctcagtgtgcgcggagcgcgagtacacaacctgaacaatgtggatctg
gagattccgcgcgattcgatggtcgtgttcacgggcctctccggatcggggaagtcctcg
ctggcgttcgacacgatcttcgcggagggacagcgccgctacgtcgagtcgctttcggcg
tacgcgcgccagtttctcggccaggtggaccgtccggatgtggatttcatcgaggggctc
agcccggcggtgtcgatcgaccagaaatccacgaaccgcaacccgcgttcgacggtcggg
acgatcaccgagatctacgactacatgcggttgctctgggcgcgtatcggcgtgccgcac
tgcccggtctgcggcgagaggatccagcggcagacggtgcagcagatcgccgaccagctg
atggagttagagccgggcacccggtacatggtcgtcagccccgtcgtctcccagaagaag
ggcgagttcgtcgacctcttcaaggagctggcggccagcggctattcacgagcgctggtg
gacggcgaacccgtgcagctgagcgacccgcccgccctcaagaagcagtacaaacacgac
atctcggtcgtggtggaccgcctggtggcaggccccgacatcctgggacggctcaccgac
tcgctggagaccgcgctgcggctgacggagggggtggtgcaggtcaatttcgtcgaccgt
gagggtccggaggcgtggcagagcttctccgagaagctctcctgcccgaacgggcacccc
ctccagctgaccgagatcgagccgcggaccttctcgttcaacgctccgttcggcgcgtgc
ccggagtgctcgggcctcggcatccggatgtccgtggacgacgacctgctcctcggcgac
gaaaacttgagcattgccgagggggtcatcgtcccctggacgacgcagggcaagggcctc
ttcagctactacgagaagctgctcgacggcctggcgcgggacctcgagttctcgctcaca
acgccgtggagaaaactgtcgcagagcgtgcgggaggccgtgctgcacggcgacaacttc
gacgtcaaggtgcggtggaagaaccgctacggccgcgagatgtcctacacctccggtttc
gagggcgtggtgccctacatcgagcgccagtacctgcaggccgagacagacacgcagcgc
gcccggtgggccgagtatctgcgcgaggtgccgtgtcccgtctgcaaggggaagcgcctg
aagccggaagtgctcgccgtgctcatccacggcagctccatcgccgacgcggccgagctg
agcctcggcgacgcgcgtggcttcatggagaagctgcgcctgaccgagcgcgagcagaag
atcggcgcccaggtgctgcgcgagatcaagatccggctcgacttcctcatccaggtcggg
ctcagctacctcgacctcgcacgggcggcggcgacgctctccggcggcgaggcgcagcgc
atccgcctggcgactcagatcggctccggactgacgggcgtgctgtacgtgctcgacgag
ccgagcatcgggctgcaccagcgcgacaaccgtcggctcatcgacacgctcgtcgctctg
cgcgacctcggcaacacgctcatcgtggtcgagcacgacgaggacacgattcgcaccgcg
gactggatcgtggacatcggccccggcgcgggcgtgaacggcgggcacgtcgtccactcg
ggctcctattccgatctcgtggagaacaccgcttccctgaccggagattacctctccgga
cgccgcgagatccccgttccgccgaagcgccgcacgatcgacaagaagcggatgctgaag
gtcgtggacgccacagccaacaacctccagaaggtgactgtcgacttccccctcggagtg
ttcgtcgcggtgaccggcgtctccggctcgggtaaatcgtcgcttgtgaacgacatcctc
taccgcgtgctggcgaacaagctcaacggcgcacgcaagctgccgggaaagcaccgcacg
gtgaccgggctcgacaacctcgacaaggtcgtccacgtcgaccaggctccgatcggccgc
accccgcgctcgaacccggcgacctacaccggggtgttcgatcgcattcggaccctcttc
gcggagacgccggaggcgaagatgcgcgggtatctgccgggccggttcagcttcaatgtc
aagggcgggcgctgcgaggcctgctcgggcgacggcacgatcaagatcgaaatgaacttc
ctgcccgatgtctacgtggcgtgcgaggtgtgcgggggagcgcgctacaaccgcgacacc
ctctcggtccactacaagggcaagagcatcgccgaggtgctcgacatgcccatcagcgag
gcggctgagttcttcgagccgatctcggccatccatcgctatctcaagacgctggtggag
gtcgggctcggctatgtgcggctcggccagagcgcgaccaccctctccggcggcgaggcg
cagcgcgtcaagctcgcgaccgagttgcagcgccggtcgaacgggcgcagcgtctacgtc
ctcgacgagccgacgacgggcctgcacttcgaggacgtccgcaagctcctgctggtgctg
aacggcctgctggacaagggcaacaccgtgatcaccatcgaacacaacctcgacgtcatc
aaatcggccgactggatcatcgacatgggtcccgagggcggcgcgggcggcggcacggtc
gtggcgaccgggacgcccgagcaggtcgcggacgcaccgggcagccacaccgggcacttc
ctcaaggagatcctgcggggcgaggcgtcggccgcgcggggcgccgcttag
DBGET
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