Leifsonia xyli subsp. xyli CTCB07: Lxx11820
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Entry
Lxx11820 CDS
T00190
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lxx
Leifsonia xyli subsp. xyli CTCB07
Pathway
lxx03030
DNA replication
lxx03430
Mismatch repair
lxx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lxx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Lxx11820
03430 Mismatch repair
Lxx11820
03440 Homologous recombination
Lxx11820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lxx03032
]
Lxx11820
03400 DNA repair and recombination proteins [BR:
lxx03400
]
Lxx11820
Enzymes [BR:
lxx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Lxx11820
DNA replication proteins [BR:
lxx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Lxx11820
DNA repair and recombination proteins [BR:
lxx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Lxx11820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Tenui_N
Motif
Other DBs
NCBI-ProteinID:
AAT89028
UniProt:
Q6AF17
LinkDB
All DBs
Position
complement(1216073..1216756)
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AA seq
227 aa
AA seq
DB search
MSWHHELGVFDLETTGVDVETARVVTAHIGLLDEHGEIVHGRSWLLDPGVEIPAEASAVH
GISTELAREKGMDAARGIAGIVDQLRRLFARSVPVVAYNAPYDFSLLDREARRHGIEPLH
SPGPIIDPLVIDRAVDKFRPGKRTLTVTADHYGIVLTDAHDAGADAIAAGRLAQALARRH
TEHLAIDAAELHRRQIGWCREQVADFQEYMRRVRDPEFTASGDWPLL
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgagctggcaccacgaactcggtgtgttcgatctggagaccacgggcgtcgacgtggag
accgcccgcgtggtcacggcgcacatcggcctgctcgacgagcacggcgagatcgtccac
ggccgctcctggctgctcgaccccggtgtggagatccccgccgaagcctccgcagtccac
ggcatcagcaccgagctggcgcgtgagaaggggatggacgccgctcgcgggatcgcgggg
atcgtggatcagctgcgccggctcttcgcccgcagcgtccccgtcgtcgcctacaacgca
ccctacgatttcagtctcctcgaccgcgaggcacggcgtcacggaatcgagccgctccac
tcccccggccccatcatcgacccgctggtcatcgaccgcgccgtcgacaagttccggccc
ggcaagcgcaccctcactgtcaccgcggaccactacggcatcgtcctcactgacgcccac
gacgcgggagcggacgccatcgcggccggtcgcctggcacaggcgctcgcacgccggcac
accgagcatctggcgatcgacgcggccgagctgcaccggagacagatcggttggtgccgg
gagcaggtggcggattttcaggagtacatgcgccgagtgcgcgatccggagttcactgcg
tcgggagactggccgctgctctga
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