Leifsonia xyli subsp. xyli CTCB07: Lxx12050
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Entry
Lxx12050 CDS
T00190
Name
(GenBank) fibronectin-related protein
KO
K20276
large repetitive protein
Organism
lxx
Leifsonia xyli subsp. xyli CTCB07
Pathway
lxx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lxx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Lxx12050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
Cadherin_5
fn3
K319L-like_PKD
Motif
Other DBs
NCBI-ProteinID:
AAT89051
UniProt:
Q6AEZ4
LinkDB
All DBs
Position
1246542..1252484
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AA seq
1980 aa
AA seq
DB search
MRAADGFAVIRVWLMAHKSLAATVVSGAVITAFVTTLAVVSGGYSAQRFQIGDASVWVAS
EAKKSLGRANTEIGKLNSIVPGSGEALDVVQDGENVLLLDREANTAAVVNPATAEAGESV
ALPPRSPQVLVAGGRVALLSRATGQLWLTSVGQLSTFASSSVATMDLGGRAVAAMDPAGV
LYAYQPDARTVTRVDLGGDQPTRTTSRVPASGDGANAQLTTAGGQWAMFDPDARTLWLPG
RKVDLASLLGGSSAAVVQQPSGGSAAVWIASSGGLLRVPLDGSAPRRVLTAVSGTPVAPA
VSHGCAYAAWESGTVFRSCSDDGPGQRSTIDRSPGGGALVFRANRGRLLLNDTRSGVAWA
VQNGNTRIDNWDELVSQKTAKELVDQSRQDTKPHYEKQEQPPVAVADHFGARPGRVTPLP
VLLNDYDPNGDVLTIDSVTAIPESQGTLELTNADQQVQIALPATASGSIAFDYTISDGRG
GTATAHVTVTVRSPVENSPPLCVRAAKAVVQAGGRVTTPVLGDCYDPDGDSFFLAGATVP
APYTVTFTPQGQVAFSDHGQGGGVKDVSLVLSDGRAEGSGQLAVTVQPPGQVPIIADPFA
VVTSQSQEVMVRPLDHVRGGNGTVRLSTVPSKADATITPDYQGGTFRFVSDQPGPHTIEY
SVTDGTVTATGVVRVVVRASLGARTAPIAVPHTAFIRELSNQDVDVLSTDIDPSGGVLLV
TSVAGPSPSTGIRVQALQQRTLRVTLTRPLEQSVDFHYRLSNGIADAEGTVTVVQLPPLT
VHQPPVAAPDSVAVRVDDVVDIPVLANDVQPDGGKLALDPTLATPLPSGAGLLFASGDHL
RYLAPSRPGNYTAVYRVTGEDGQWATAEVGIAVRERDEAANNPPVPKTVTVRVLAGDTVR
IAIPLSGIDPDGDSVQFVGQETNPQKGAVIASGSDWLDFRAGDYAAGTDSFTYTVVDALG
SRATGTVRVGIAPRSGGAHNPVAVEDDVTTRPGKTLSVQVLRNDSDPDGSPLSVTAVTSL
DSRARAEIRGDIVVVAVPRSEGAYGFLYTIQNDLGGTSQAFLRVMADKNAPPARPIVTDT
TLELSDVLGKDRISVNVLSSVFFADGPVSSLKLSIVPGYGRSAETTAAGRIRVTIRAKSQ
VIPFKVANPEDGSYSAYGFVHVPGYDDALPQRRRGAPELSVVSEKTLTIHLNDVIVAVGG
RKVRLTDAATVRVTHSNGADPVANSDTLQFTSANRYFGPASISFQVTDGSSPTDPKGNVT
TIVLPIEVTPRENQPPVFTGALIDFEPGESKTIDLTKLTSYPYAKDLAELAYSIQDPRPD
GVSLSLSGQSLTIGVGAGVEKGAKPDILIGVKDVVKTGQPGHIDLTVVPSTRPLASPQPD
RVIAPRGQTTTVDVLANDAATNPFPNQALRMIAVRGLGGSLPAGVTVTPSADSSVLAVTV
TSTAAPVDTTLQYEVMDATGDPDRYTWGTVVISVQDRPSPVSDVRVTAIGDLSLTLSWTP
GSFNNAPITGFEVTQTRAATGAVVSTTSCPSTVCVIPTPGNGPDAAVTLSVRARNALGLS
EPTAYVEPVWSDVVSNAPTGLSASPLDHGLRISWTKPVDAPGASPITSYVVTVGGLTNTV
QVSGADAVGSSYSLNVTDPGIANGAVLSFSVASRNGFYRGRTTSNQSTGSAVPSGAPVLT
GVAPVATPDTTDGTSATLTWSSVFGENGKAISAYYAGVFQGGAPPNCSVTGVQTGEPVLH
VDPVSGSFQRVTDANATFTGLLPNHSYSFVVYADNGQGCTASAVVSATQRQKPGSVSSVR
IFGPERNGAANTWDYFASVGYAPGSGSNPTVSYQLLSGGAVVDSGTLNGTKGVLSGTSGQ
HYGMDLTVRITSVCETSPDGSQLCASQSASRSMGTAVSAAIESPRYDPESRRFTWTGWPT
GSGYDRVEYGCDGITRQDMPAAGQVADCTVPPGVALPVLTIIVSANGDAYRYAYPASSMQ
NT seq
5943 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgcagcggatggattcgccgtgatccgcgtctggctcatggcgcacaagtccctc
gcggcgacagtcgtgagcggggccgtgatcacagccttcgtgacgaccctcgcggtggtc
tctggtgggtacagcgcccagcgcttccagatcggcgacgcctcggtgtgggtcgcgagc
gaggcgaagaagtcgctggggcgggccaacaccgagatcggcaagctcaactcgatcgtc
ccgggctccggtgaggcgctggatgtggtgcaggacggggagaacgtgctcctgctcgac
cgcgaggcgaacaccgctgcggtcgtcaacccggccacggcggaggctggcgagtccgtc
gctctcccgccgcgctcgccgcaggtactcgtcgccggtggcagagtcgctctgctctcg
cgggcgacggggcagctgtggctgaccagcgtcgggcagctgtcgacgttcgcctcgagc
tcggtggcgacgatggatctcggcggccgtgcggtcgctgcgatggaccccgcgggtgtg
ctctacgcctaccagcccgacgcccggaccgtcacccgtgtcgatctcggcggcgatcag
cccacgaggacgaccagcagagttcccgcctccggggacggcgcgaatgcccagctcacc
acggccggcgggcagtgggcgatgttcgacccggacgcccggacgctgtggctcccgggg
cgcaaagtggacctcgcttcgctgctcggcggcagcagcgccgccgtggtgcagcagccg
tcgggcgggagcgcagcggtgtggatcgcgagctccggtggtctgctccgggttccgctc
gacggttcggcgccccggcgggtgctcacggcggtgtccggaacgccggttgcgccagcc
gtgtctcacggttgcgcgtacgcggcttgggaaagcggcacggtgttccgttcctgctcg
gatgacggccccgggcagcgctcgacgatcgaccgatctccgggtggtggcgcgctcgtc
ttccgtgcgaaccggggccggctgctcctgaatgacacccgctccggtgtcgcctgggcg
gtccagaacgggaacacgcgcatcgacaactgggacgaactggtctcgcagaagaccgcg
aaggagcttgtcgaccagtcccggcaggacacgaagccacactatgagaagcaggagcag
cccccggtcgcggtggccgatcatttcggcgcccgtccgggccgggtcacaccgctcccg
gtgctcctcaacgactacgaccccaacggcgatgttctgacgatcgactccgtcacggcc
attcccgagtcgcagggaacgctggagctaaccaacgcggatcagcaggtgcagattgcg
ctgccggccaccgcctccggctcgatcgctttcgactacacgatctcagacgggcggggc
ggcaccgcgaccgcccacgtcaccgtcaccgtgcggagccctgtcgagaactcgcctccg
ttgtgcgtgcgggccgcgaaggctgtggtgcaggccggcggccgggtcaccaccccggtg
ctcggcgactgctacgacccagacggcgactctttcttcctcgccggggcgaccgtgccg
gcgccgtacacggtgacgttcactccgcaggggcaggtcgctttctccgaccacggtcag
ggcggcggagtcaaggatgtctccctcgtcctctccgacggccgcgcggagggcagcggc
cagctcgctgtgaccgtgcagccgccgggccaggtgccgatcatcgccgacccgttcgct
gtggtgacctcccagagccaggaagtcatggtccggccgctcgaccacgtccgcggtggc
aacggaacggtccgcctgagcaccgtgcccagtaaagccgacgcgacgatcacgcccgac
taccagggcggcacgttccgcttcgtttccgaccagccgggcccccacaccatcgagtac
tcggtgacggacggcaccgtgaccgcgaccggtgtggtccgggtcgtggtccgggcgtct
ctcggagcgaggaccgcgccgatcgctgtaccgcacacggcgttcatccgcgagctgtcc
aaccaggacgtcgatgtcctctccaccgacatcgacccctccggcggggttctgcttgtc
acgagtgtggccggccccagcccgtcgaccggcatccgcgtccaggcgctgcagcagcgc
accttgcgggtgaccctcacccgccccctcgagcagtcggtggacttccactaccggctc
tccaatggcatcgccgacgccgaaggaacggtcaccgttgtccagctgccgccgttgacc
gtgcatcaaccgcctgtcgctgcgcccgactctgtcgcggtgcgcgtggacgatgtagtc
gacatccccgtgcttgcgaacgacgttcagcccgacggcggcaagctagccctcgacccg
acgctcgcgacgccgctgccctccggtgcgggactgctcttcgccagcggcgatcacctg
cgctacttggccccgtcgagaccgggtaactacaccgctgtctaccgtgtcaccggcgag
gacgggcagtgggcgacggcggaggtcggcatcgcggtgcgggaacgcgatgaggcggct
aacaatcccccggttccgaagacggtcacggtgcgcgtgctcgccggtgacaccgtgcgg
atcgccatcccgctgtcgggaatcgacccggacggcgactccgtccagttcgtcgggcag
gagacgaacccgcagaagggcgcggtgatcgcttccgggtcggattggctcgatttccgg
gccggcgattacgcggcggggacggactcgttcacgtatacggtggtggatgcgctgggt
tcccgggcgaccggcactgtccgtgtcggcatcgcgccgcggtccgggggcgcgcacaac
cccgtcgccgtcgaggacgatgtgacgacgcggccgggaaagacgctgagcgtccaggtg
ctcaggaacgacagcgacccggacgggagcccactgtctgtcacggcggtgacctcgctc
gacagcagggccagggcggagatccggggcgatatcgtcgtggtggccgtgcctaggtcg
gagggcgcgtacgggttcctatacactatccagaacgacctcggcgggacgagccaggcc
tttctccgggtcatggcggacaagaacgcccctcccgcgcggccgatcgtcaccgacacg
acgctcgaactttcggacgtcctggggaaggaccggatatcggtcaacgtcctgtcgagc
gtgttcttcgcggacggcccggtcagctcgctgaagctctcgatcgttccgggatacggc
aggagcgccgagaccacggcggccggccgcatccgggtgacgatccgcgccaagagccag
gtcatcccgttcaaagtggcgaaccccgaggacgggtcgtactcggcttacggcttcgtg
catgtccccggctatgacgacgcgctgccgcaacggagacgcggtgcgcccgaactctcg
gtggtgagtgagaagacgctcaccatccacctgaacgacgtcatcgtcgcggtcggcgga
cgtaaggtgagactgaccgacgcggcgacggtcagggtgacgcactccaacggcgccgac
cccgtggcgaacagcgacacgctgcagttcacttcggccaaccgctacttcggtccagcc
tcgatctccttccaggtcacggacggatccagccccaccgatccgaaggggaacgtcacg
acgatcgtgttgccgatcgaggtgaccccgcgcgagaaccagccgcctgtgttcacgggc
gcgctcatcgacttcgagccgggggagtccaagacgatcgacctcaccaaactcacgagc
tatccctacgccaaagacctggcagagctcgcttacagtatccaggacccgcgtccggac
ggagtttcgctgtcgctctccgggcagagtctgacgattggagtgggtgcgggggtggag
aagggcgccaagcccgacattctgatcggggtgaaggatgtggtgaagaccggtcagccc
ggccacatcgacctcaccgtggtgccctcgactcgcccgctcgcgagcccccagcccgac
cgggtgatcgccccgcgcggtcagaccacgaccgtcgacgttctggcgaacgacgccgcg
acgaacccgttcccgaaccaggcgctgcgcatgatcgccgtgcgaggcctcggcgggagc
cttccggccggggtcaccgtgaccccgagcgcagacagctccgtgctcgcggtcacggtc
acgagcacggccgccccggtggacaccacgctccagtacgaggtcatggacgccacggga
gacccagaccgctacacctggggcaccgtcgtcatctcggtccaggaccgcccctcgccg
gtttcggacgtccgggtcaccgccatcggggatctcagcctcaccctgagctggactccg
ggttctttcaacaacgctcccatcacggggttcgaggtgacccagacgcgggccgccact
ggagccgtcgtgtcgaccaccagctgtcccagcacagtgtgcgtcatccccacaccgggc
aacggaccggacgccgccgtcaccctcagcgtccgggcgaggaatgccctcggcctctcc
gagccgacggcgtatgtcgagccggtctggtcggatgtggtctcgaacgcaccgaccggg
ctctccgcctcgccgcttgaccacggcctgcggatcagctggacgaaaccggtcgatgcc
ccaggcgctagcccgatcacgtcgtacgtcgtgaccgtcggcggtctcacgaacacggtc
caggtctccggcgcggatgccgtcggctcctcttactccctcaacgtcaccgacccggga
atcgcgaacggcgccgtgctctcgttcagcgtggcatcgcggaacgggttctaccggggc
cgcacgacctcgaaccagagcacaggcagcgctgtgccctcgggggctccggtgctgacc
ggggtcgcacccgtcgcgacaccggacacaaccgatggcacgagcgcgacgctgacctgg
tcgtcggtcttcggcgagaacggcaaagccatcagcgcctactacgccggggtgttccag
ggcggtgcgccgccgaactgctcggtgaccggtgtgcagacgggcgagccggtgctccac
gtcgatcccgtgtcgggatcgttccagcgtgtcaccgatgcgaacgccacattcaccgga
ctgctccccaaccactcgtacagcttcgtcgtctacgccgacaacggtcaggggtgtacg
gcctcggccgtggtcagcgccacgcagcgacagaagccgggaagtgtaagtagcgtccgg
atcttcggtcctgagcggaacggcgccgcgaacacttgggactacttcgcttcggtcggc
tacgcgccgggcagcggctcgaacccgaccgtctcctaccagctcctcagcggcggtgcg
gtggtcgacagcggaacgctgaatggaactaagggggttctttcggggacgagcggccag
cactacgggatggatctcacagtgcggatcacgagcgtctgcgagacctctccggacggt
tcgcagctgtgtgcttcccagagtgcgtcccgcagtatggggacggcggtcagcgcggcg
atcgagagtccacgctacgatccggagagccggaggttcacctggacgggctggccgacc
ggaagtggctacgaccgcgtcgagtacggctgcgacgggatcacccggcaggacatgccg
gctgccgggcaggttgctgactgcaccgtccctccgggcgtcgcgctcccggtgctcacg
atcatcgtctccgccaacggcgacgcctatcggtacgcctatcccgcatcaagcatgcaa
tga
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