Leifsonia xyli subsp. xyli CTCB07: Lxx15670
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Entry
Lxx15670 CDS
T00190
Name
(GenBank) RNA polymerase, sigma-70 family factor
KO
K03086
RNA polymerase primary sigma factor
Organism
lxx
Leifsonia xyli subsp. xyli CTCB07
Pathway
lxx02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lxx00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Lxx15670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lxx03021
]
Lxx15670
Transcription machinery [BR:
lxx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Lxx15670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Phage_TAC_7
Motif
Other DBs
NCBI-ProteinID:
AAT89372
UniProt:
Q6AE24
LinkDB
All DBs
Position
complement(1629861..1630787)
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AA seq
308 aa
AA seq
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MRGDTMTVLEVTNDPVRDYLNSIGRTWLLTAEDEVSLAKRIEVGVLAGERLATRPGLSPR
EKRELHVLSDDGKRAFERFIEANLRLVVSIAKRYAGRGLAVMDLIQEGNLGLVRAVEKFD
YRTGNKFSTYATWWIRQSILRGIADTARVIRIPVHTVEKIDKLDRIRRDLGGELGRTPTL
EEIADAASLTPAEVHKLQMSDSETVSLAVPVGENEGAELGDLIEDGDAPGPSERVEVEFR
HRDLEERLRELPLRDAKVVRMRFGLDGRKPMTLDEVGAVYGITRERVRQLETRSLKRLRS
PELLEYLR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgaggggtgacacgatgacggtgctcgaagtgacgaatgatccggtccgcgactacctc
aattcgattggacggacatggctgctgaccgcggaagatgaggtctcgctcgccaagcgg
atcgaagtcggcgtcctcgcgggggagcgtctcgccacacggccggggctctctcctcgg
gagaagcgcgaactgcacgttctctccgacgacggcaagcgcgctttcgagcggttcatc
gaggccaatctgcgcctggtcgtcagcatcgcgaaacgctacgccggacgcgggctggcc
gtgatggacctcatccaggagggcaacctgggcctggtgcgcgcggtcgagaagttcgac
taccgcactgggaacaagttctccacttatgcgacctggtggattcgtcagtccatcctg
cgtggcatcgccgacacggctcgtgtgatccgcatccccgttcacaccgtggagaagatc
gacaagctggaccgcattcgccgcgacctcggcggcgagctgggccggacgcccaccctg
gaagagatcgcggatgccgccagcctgaccccggctgaagtccacaagctgcagatgagc
gattcggagaccgtttcgctcgctgtcccggtcggggagaacgagggcgccgaactcggc
gatctcatcgaggacggcgacgcccccggcccctccgagcgcgtcgaggtcgagttccgt
caccgggacctggaggagcgcctgcgtgagctgccgctgcgcgacgccaaagtggtgcgt
atgcgcttcggcctcgacgggcgcaagccgatgactctggacgaggttggcgcagtctac
ggcatcacccgcgagcgcgtccgtcagctggagacccgcagcctgaagcggttgcgctcc
ccggaactgctcgaatacctgcggtga
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