Leifsonia xyli subsp. xyli CTCB07: Lxx16750
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Entry
Lxx16750 CDS
T00190
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
lxx
Leifsonia xyli subsp. xyli CTCB07
Pathway
lxx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lxx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Lxx16750 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lxx03400
]
Lxx16750 (xseA)
Enzymes [BR:
lxx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Lxx16750 (xseA)
DNA repair and recombination proteins [BR:
lxx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Lxx16750 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
AAT89447
UniProt:
Q6ADU9
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All DBs
Position
1743008..1744387
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AA seq
459 aa
AA seq
DB search
MRGMGRLMVASLTLRSYAASAEEGMRGTRVTETASAPRMAPGPPTLDDPWPVALLASKIR
GWIERLGTAWVEGEITQWGVSGGNVYGKLKDLNEDATVGFTIWSSVKARIPADLKQGDRV
IAAVKPNYWLKGGTLTMQVSDMRHVGLGDLLERLERLRAQLRAEGLFRPERKKRLPFLPH
TIGLVTGKDSDAEKDVLRNAQLRWPQVRFRTVYAAVQGDRTVPEVTAALRELDADPEVEV
IIVARGGGDFQNLLGFSDESLLRAAAGLSTPLVSAIGHEADRPLLDEVADLRASTPTDAA
KRVVPDVAEELVRVHQARARIGTRLTHIIRHEIDRIGHLRTRPALASGSWIVDSRAQDLT
RFVARGAELVERCVDREAARVAELRGQLRALSPQATLERGYAIVQNAAGRVVAAPGEAPA
GTELRITVSGGSLAATAGKALPSPAQGATNGSLAAPRGK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcatggggaggctgatggtcgcgtcgctcacccttcgatcgtacgcggcaagc
gctgaggaagggatgagaggaacgcgagtgacggagacggcgagtgcgccccggatggcc
cccggacctcccactctcgacgatccgtggccggtcgcactgctggcgtcgaagatccgc
ggctggatcgagcggctcggcacggcgtgggtggagggcgagatcacccagtggggcgtc
tccggcggcaacgtctacggcaagctgaaggatctgaacgaggacgccaccgtcggtttc
acgatctggtcgtccgtcaaagcgcgcatccccgccgatctgaagcagggcgaccgggtg
atcgccgccgtcaagccgaactactggctcaagggcgggacgctcaccatgcaggtctcc
gatatgcgccacgtcggcctcggcgacctcctcgaacggctcgagcggctgcgcgcgcag
ctgcgcgccgaggggctcttccgccccgagcgcaagaagcgcctcccgttcctcccgcac
acgatcgggctcgtcaccgggaaagactcggacgccgagaaggatgtgcttcgcaacgcc
cagctgcgctggccgcaggtgcgcttccgcaccgtgtacgccgccgtgcagggcgaccgg
acggtaccggaggtgacagcggccctccgggagctggacgccgaccccgaggtcgaggtc
atcatcgtcgcccgcggcggcggcgacttccagaacctcctcggcttcagcgacgagtcc
ctgctccgcgcagcggccggcctcagcacgccgctcgtcagcgccatcggccatgaggcc
gaccggccgctgctggacgaagtggccgatctgcgcgcgtcaactcccaccgacgccgcc
aagcgggtggtcccggacgtcgccgaagagcttgtccgggtccaccaggcccgcgcccgg
atcgggacgcggctcacgcacatcatccggcacgagatcgaccgcatcgggcacctcagg
acccggcccgccctcgcctccgggtcctggatcgtggattcccgcgcccaggatctgacg
cgcttcgtggcccgcggggccgaactcgtggagcgctgcgtggaccgcgaggccgcccgg
gtggccgagctgcgcggacaactacgcgcgctgagcccgcaggcgacgctggagcgcggg
tacgcgatcgtgcagaatgcggcgggccgtgtcgtcgcggcgccaggggaggcgccggcg
ggaacggaactgcggatcaccgtctccggcgggtccctggccgcgaccgccgggaaggcg
ctcccctcgccggcgcagggcgcgacgaacggctcgctggccgccccgcgggggaaatag
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