Leifsonia xyli subsp. xyli CTCB07: Lxx18640
Help
Entry
Lxx18640 CDS
T00190
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lxx
Leifsonia xyli subsp. xyli CTCB07
Pathway
lxx00260
Glycine, serine and threonine metabolism
lxx00630
Glyoxylate and dicarboxylate metabolism
lxx00670
One carbon pool by folate
lxx00680
Methane metabolism
lxx01100
Metabolic pathways
lxx01110
Biosynthesis of secondary metabolites
lxx01120
Microbial metabolism in diverse environments
lxx01200
Carbon metabolism
lxx01230
Biosynthesis of amino acids
lxx01240
Biosynthesis of cofactors
lxx04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
lxx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Lxx18640 (glyA)
09102 Energy metabolism
00680 Methane metabolism
Lxx18640 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Lxx18640 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Lxx18640 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Lxx18640 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Lxx18640 (glyA)
Enzymes [BR:
lxx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Lxx18640 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AAT89595
UniProt:
Q6ADF0
LinkDB
All DBs
Position
complement(1919872..1921164)
Genome browser
AA seq
430 aa
AA seq
DB search
MTDTLPSTFTASLAEVDPEIAEVLQLELGRQRDYLEMIASENFVPRAVLESVGSVLTNKY
AEGYPGRRYYGGCEYVDIAEQLAIDRAKSLFGAEYANVQPHSGASANAAVLSAIATPGET
ILGLELAHGGHLTHGMKLNFSGKLYNAVAYGVDPETFLVDMDAVRDRALEHKPQVIIAGW
SAYPRQLDFAAFRAIADEVGAKLWVDMAHFAGLVAAGLHPSPVPYADVVSSTVHKTLGGP
RSGFIVSRDTELAKKLNSNVFPGQQGGPLMHVIAAKATAFKLAATDEFKDRQARTIRGAQ
LLAERLTAADSRASGVDVLTGGTDVHLVLADLRTSELDGQQAEDILHEVGITVNRNAVPF
DPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIALALRPGADTRALRARVDALTAAFP
LYPGLAPSAS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacaccctgccgtccaccttcactgcgtcgcttgcggaggtcgacccggagatc
gccgaggtgctccagttggagctcggccgccagcgcgactacctggagatgatcgcgtcc
gagaacttcgtgccgcgcgccgtcctggaatccgtcggttcggtgctgacgaacaagtac
gccgaagggtatccggggcgtcgctactacggcggctgcgagtacgtggacatcgccgag
cagctggcgatcgaccgggcgaagagcctgttcggcgcggagtacgcgaacgtgcagcca
cactcgggcgcctcggccaacgcggccgtgctctccgccatcgcgaccccgggcgaaacc
atcctgggcctggaactcgcccacggcgggcacctgacgcacgggatgaagctgaacttc
tccggcaagctctacaacgcggtcgcctacggcgtcgacccggagaccttcctcgtcgac
atggacgctgtgcgcgacagagcgctcgagcacaaaccgcaggtcatcatcgccggctgg
tcggcctacccgcgtcagctcgacttcgctgcgttccgggcgatcgcagacgaggtgggc
gccaagctgtgggtggatatggcccacttcgccggccttgtcgcggccggtctgcacccc
tcgcccgtgccctacgccgacgtcgtctcctcgactgtccacaagacgctcggcggcccc
cgctccggtttcatcgtcagccgggacacggagctggcgaagaagctcaactcgaatgtg
ttccccggtcagcagggcggcccgctcatgcacgtgatcgccgcgaaggcgaccgcgttc
aagctggcggcgaccgacgagttcaaggaccgtcaggcacgcaccatccgtggcgcgcag
ctcctcgccgagcggctcaccgccgccgactcccgcgcatccggtgtggatgtgctcacc
ggcggcaccgatgtccacctggtgctcgccgatctgcgcacgtcggagctcgacgggcag
caggcggaggatatcctgcacgaggtcgggatcacggtcaaccgcaatgcggtgccgttc
gacccgcgcccgccgatggtcacctcgggcctccggatcggcaccccggcgctggcgacc
cgcggcttcggcgacaccgagttcaccgaggtcgccgacatcatcgcgctggcgctccgt
cccggcgccgacacccgcgcgctccgtgcccgcgtcgacgccctgaccgccgcctttccg
ctctaccctggcctcgcgccctccgcgagctga
DBGET
integrated database retrieval system