Leifsonia xyli subsp. xyli CTCB07: Lxx18890
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Entry
Lxx18890 CDS
T00190
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lxx
Leifsonia xyli subsp. xyli CTCB07
Pathway
lxx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lxx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Lxx18890 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lxx03400
]
Lxx18890 (ung)
Enzymes [BR:
lxx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Lxx18890 (ung)
DNA repair and recombination proteins [BR:
lxx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Lxx18890 (ung)
Prokaryotic type
Lxx18890 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AAT89619
UniProt:
Q6ADC5
LinkDB
All DBs
Position
complement(1948410..1949102)
Genome browser
AA seq
230 aa
AA seq
DB search
MPKSLAELAADGSMDPGWAEALAPVADRIAAMGDFLRAEVAAGRPYLPAGANVLRAFRAP
FADVRVLIVGQDPYPTPGHPIGLSFAVERQVYPLPRSLQNIYQELRDDLGLAPPPHGDLS
AWSGNGVMLLNRVLTVRPGAPASHRGKGWEPITEHAIRSLVARGRPFVSILWGRDASTLK
PLLGGNPAIESPHPSPLSASRGFFGSKPFSRANALLERVGERPVDWALSP
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaatctctcgccgaactcgccgcagatgggtcgatggacccgggctgggctgag
gctctcgcccccgtcgccgatcgcatcgccgcaatgggcgatttcctccgcgcggaggtc
gcggccggccggccgtacctgcccgccggcgccaacgtcctgcgcgccttccgcgcgccg
ttcgccgatgtgcgggtcctcatcgtcggccaggacccgtaccccacccccgggcacccc
atcggtctctcgttcgctgtcgagcggcaggtgtacccgctgccgcggagccttcagaac
atctaccaggagctgcgcgacgacctcggcctcgcaccgcccccgcacggcgacctcagt
gcgtggtcgggcaacggggtcatgctgctcaaccgggtcctcaccgtccggccgggggcg
ccggcctcgcaccgcggcaaggggtgggagccgatcaccgagcatgccatccgctccctc
gtcgcccgggggcggccgttcgtcagcatcctgtgggggcgggacgcctcgacgctgaag
ccgctcctcggcggcaacccggcgatcgagtcgccccacccgagtccgctctcggcgtcg
cgcgggttcttcgggtcgaagccgttctcccgtgcgaacgcgctgctggagcgggtgggg
gagagaccggtcgactgggcgctgtcgccgtaa
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