Leifsonia xyli subsp. xyli CTCB07: Lxx21340
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Entry
Lxx21340 CDS
T00190
Symbol
clpC
Name
(GenBank) ATP-dependent Clp protease, ATP-binding subunit
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
lxx
Leifsonia xyli subsp. xyli CTCB07
Brite
KEGG Orthology (KO) [BR:
lxx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lxx03110
]
Lxx21340 (clpC)
Chaperones and folding catalysts [BR:
lxx03110
]
Heat shock proteins
HSP100
Lxx21340 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
UVR
TniB
nSTAND3
bpMoxR
ATPase_2
AAA_14
AAA_18
IstB_IS21
AAA_3
TsaE
AAA_7
AAA_28
DNA_pol3_delta2
RsgA_GTPase
Mg_chelatase
NACHT
AAA_24
Zeta_toxin
AAA_19
DUF99
T2SSE
ResIII
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
AAT89829
UniProt:
Q6ACR4
LinkDB
All DBs
Position
complement(2194841..2197360)
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AA seq
839 aa
AA seq
DB search
MFERFTDRARRVVVLAQEEAKMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVR
EQVQDIIGQGQQQPTGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA
AQVLVKLGADLNRVRQQVIQLLSGYQGKEQVQVGGNDQATAQAGSQILDQFGRNLTQAAR
DNKLDPVIGREKEIERVMQILSRRSKNNPVLIGEPGVGKTAVVEGLAQAIVRGDVPETLK
DKQLYTLDLGSLIAGSRYRGDFEERLKKVTKEIRTRGDIITFIDEIHTLVGAGAAEGAID
AASILKPLLARGELQTIGATTLDEYRKHFEKDAALERRFQPIQVNEPSLPHTINILKGLR
DRYEAHHKVSITDGAIVSAANLADRYIQDRFLPDKAIDLIDEAGARLRLSILSAPPELRK
FDDKIAVVRSQKEAAIEDQDFEKAASLRDEEKNLLGERLRLEKQWRSGDVKTTAEVDEGL
IAEVLAQATGIPVFKLTEEESARLVFMEKALHQRVIGQEEAIAALSKTIRRTRAGLKDPK
RPSGSFIFAGPTGVGKTELAKALAEFLFDDETAMISLDMSEYGEKHTVSRLFGAPPGFVG
FEDGGQLTEKVRRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVVDFKNTVII
MTTNLGTKDISGAPVGFQIEGDPTTGYDRMRGKVYEELKKNFKPEFLNRVDEIIVFPQLS
KPELLQIVDLFIKRLSDRLLDRDMTIELEIAAKERLIEVGFDPTLGARPLRRAVQHEIED
RLSEKILHGELSAGDHVHVDFVDGEFVFTTTARTEPIGAGINAAAIGTGPATPDIAASH
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagagattcaccgatcgcgcccgccgcgtcgtcgtcttggcccaggaagaggcc
aagatgctcaaccacaactacatcggcacggagcacatcctgctcggtctgatccacgag
ggtgagggcgtcgccgcgaaggcgctcgagtcgctggggatctcgctggatgccgtgcgc
gagcaggtccaggacatcatcggccagggccagcagcagccgaccgggcacatcccgttc
actccgcgcgcgaagaaggtgctggagctcagcctgcgcgaggcgctccagctcggccac
aactacatcggcaccgagcacatcctgctcggtctcatccgcgagggcgagggcgtcgcc
gcccaggtgctcgtcaagctcggcgcggacctcaaccgcgtgcgccagcaggtcatccag
ctgctctccggctaccagggcaaagagcaggtccaggtgggcggcaacgatcaggcgacc
gcgcaggccggcagccagatcctcgaccagttcggccgcaacctcacgcaggccgcgcgc
gacaacaagctcgacccggtgatcgggcgcgagaaggagatcgagcgcgtcatgcagatc
ctgtcgcgccgctccaagaacaacccggtgctgatcggtgagcccggcgtcggcaagacc
gccgtcgtcgagggcctcgcccaggcgatcgtgcgcggggacgtgccggagacgctgaag
gacaagcagctctacacgctcgacctcggctcgctcatcgccggctcccgctaccgcggc
gacttcgaggagcgcctgaagaaggtcaccaaggagatccgcacccgcggcgacatcata
acgttcatcgacgagatccacacgctcgtcggcgcgggcgctgcggagggcgcgatcgac
gcggccagcatcttgaagccgctgctggcccgcggcgagctgcagaccatcggcgcgacc
acgctcgacgagtaccgcaagcacttcgagaaggatgccgcgctggagcgccggttccag
cccatccaggtgaacgagccgtcgctgccgcacacgatcaacatcctgaaggggctgcgc
gaccgctacgaggcgcaccacaaggtgtcgatcacggacggggcgatcgtctccgctgcg
aacctcgcggaccgctacatccaggaccgcttcctgccggacaaggccatcgacctgatc
gacgaggccggcgcgcgcctgcgcttgtcgatcctgtcggcgccgccggagctgcgcaag
ttcgacgacaagatcgccgtggtgcgctcccagaaggaagcagccatcgaggaccaggac
ttcgagaaggccgccagcctgcgcgacgaggagaagaacctcctcggcgagcggctgcga
ctggagaagcagtggcgctccggcgacgtgaagaccacggccgaggtggatgagggactc
atcgccgaggtgctggcccaggccacgggcatcccggtgttcaaactcaccgaggaggag
tccgctcgcctcgtcttcatggagaaggcgctgcaccagcgggtcatcggtcaggaggag
gccatcgcggcgctctccaagacgatccgccgcacccgtgccggtctcaaggacccgaag
cgtccctccggctcgttcatcttcgccgggccgaccggcgtcggcaagacggagctggcc
aaggcgctcgccgagttcctgttcgacgacgagacggccatgatctccctcgacatgtct
gagtacggcgagaagcacaccgtctcccgcctgttcggcgcgcctcccgggtttgtcggc
ttcgaggacggcggccagctcaccgagaaggtccgccgcaagccgttcagtgtcgtgctg
ttcgatgagatcgagaaggcgcacccggacatcttcaactcgctgctccagattctggag
gagggacgtctgacggacggccagggtcgcgtcgtcgacttcaagaacaccgtgatcatc
atgaccacgaacctcggcacgaaggacatctccggggcccctgtcggcttccagatcgag
ggcgacccgaccaccggctacgaccggatgcgcggcaaggtgtacgaggagctgaagaag
aacttcaagcccgagttcctgaaccgcgtggacgagatcatcgtcttccctcagctgagc
aagccggagctgctgcagatcgtggatctgttcatcaagcggctgtccgaccgcctgctc
gaccgggacatgacgatcgagctcgagattgcggcgaaggagcggctgatcgaggttggg
ttcgatccgaccctcggcgcccgtccgctgcgccgcgcggtgcagcacgagatcgaggac
cggctgagcgagaagatcctgcacggcgagctgagcgcgggcgaccacgtgcatgtggac
ttcgtcgacggagagttcgtgttcacgacgaccgcgcgcacggagccgatcggcgcgggg
atcaacgccgccgccattggcaccggtcctgccacccccgatatcgccgccagccactga
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