Leifsonia xyli subsp. xyli CTCB07: Lxx21830
Help
Entry
Lxx21830 CDS
T00190
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lxx
Leifsonia xyli subsp. xyli CTCB07
Pathway
lxx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lxx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Lxx21830 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lxx03019
]
Lxx21830 (recQ)
03400 DNA repair and recombination proteins [BR:
lxx03400
]
Lxx21830 (recQ)
Enzymes [BR:
lxx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Lxx21830 (recQ)
Messenger RNA biogenesis [BR:
lxx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Lxx21830 (recQ)
DNA repair and recombination proteins [BR:
lxx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Lxx21830 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AAT89870
UniProt:
Q6ACM3
LinkDB
All DBs
Position
complement(2246845..2248740)
Genome browser
AA seq
631 aa
AA seq
DB search
MCAGPGAPAARTAAAARPPAGSPVPAPARFATPAEALRRVFGYDSFRGDQAAIIDRVAAG
GDALVLMPTGGGKSLCYQIPSLVREGTGVVVSPLIALMQDQVDALTAVGVRAAFLNSTQD
SAQRSAVERAYLAGELDILYVAPERLSSEPTKRFLERGRVALFAIDEAHCVSQWGHDFRT
DYLALSELAERWPGVPRIALTATATEATHREIAQRLGLEGAGHFVSDFDRPNIQYRIVPK
AEVRKQLLDFISGEHPGEAGIVYALSRNSVERTAEFLAGRGLTALPYHAGLDAQTRARTQ
ARFLREDGVIVVATIAFGMGIDKPDVRFVAHIDLPKSVEGYYQETGRAGRDGQPSTAWLA
YGLQDVVQQRRMIDDSPGDLAHRRRLTQHLDAMLALCETVQCRRVNLLGYFGQRSGPCGN
CDTCLMPPETWDGTVPAQKLLSTVVRLHRERNQRFGAGHLIDILRSKRTPRVDQYGHDRL
TTWGIGADLSESQWRGVARQLIALELLKPEGEYGVLTITPESAAVLAGGREVVLRREPDR
PERAARGPRAAAPSELPPADQPLFESLRAWRAGEAKAQGVPAYIVFGDATLRAVAAARPA
SLGELDGITGIGAKKREAYGQALLDVVAGRE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
gtgtgtgcaggacccggcgctcccgccgcccggaccgctgccgccgcccgcccgcccgcc
gggtcgcccgtccccgcgcccgcccgcttcgcgaccccggccgaggcgctgcggcgtgtg
ttcggctacgactccttccgcggcgaccaggcggcgatcatcgaccgcgtggcggcgggc
ggcgacgccctcgtgctcatgccgaccggcggcgggaagtcgctctgctaccagatcccg
tctcttgtgcgggagggcaccggcgtcgtcgtctccccgctcatcgcgctgatgcaggat
caggtggacgcgctgaccgcggtcggcgtcagggccgcgttcctcaactcgacgcaggac
tccgcccagcgctcggcggtcgagcgcgcgtacctcgcgggcgaactcgacatcctgtac
gtcgctcccgaacggctctcctcggagccgacgaagcggttcctcgaacgcggtcgcgtc
gctctgttcgcgatcgacgaggcgcactgcgtctcccagtgggggcacgatttccgtacc
gactacctcgctctctccgaactggccgagcgctggccgggagtcccgcgcatcgccctc
accgccacggcgacggaggcgacgcaccgggagatcgcgcagcggctcgggctggagggg
gccgggcacttcgtctccgacttcgaccggcccaacatccagtaccgcatcgtcccgaag
gccgaggtgcgcaagcagctgctcgacttcatctcgggggagcacccgggcgaggcgggc
atcgtctacgcgctctcgcggaactccgtcgagcgcaccgccgagttcctcgccggacgc
gggctgacggcgctgccctatcacgcggggctcgacgcgcagacgcgcgcgcggacccag
gcgcgcttcctccgcgaggacggcgtgatcgtcgtggcgaccatcgcgttcggcatgggc
atcgacaagcccgatgtccgcttcgtcgcgcacatcgacctccccaaatccgtcgagggc
tactaccaggagaccggccgcgccgggagggacggccagccctcgaccgcgtggctcgcc
tacggcctgcaggatgtcgtgcagcagcgccgcatgatcgacgattccccgggcgacctc
gcccaccgtcgccgcctcacgcagcacctggacgccatgctcgcgctctgcgagaccgtg
cagtgccgccgcgtgaacctgctcggctacttcggccagcgctccggtccctgcggcaac
tgcgatacctgcctcatgcctccggagacctgggacggcacggttcccgcccagaagctg
ctctccacggtcgtccggctgcatcgggagcgcaatcagcgcttcggcgccgggcacctg
atcgacatcctgcgcagcaagcggacgccgcgtgtcgaccagtacgggcacgaccggctg
acgacctggggcatcggcgcggatctttccgagagccagtggcgcggcgtggcgcggcag
ctgatcgcgctcgaactgctgaaacccgaaggcgagtacggcgtgctgacgatcaccccg
gagagcgccgccgtgctggcgggcggccgcgaggtggtgctgcgccgtgagccggaccgg
ccggagcgcgcggcgcgcgggccgcgggccgccgcgccgagcgagctgccgcccgcggat
cagccgctgttcgagtcccttcgggcgtggcgggcgggggaggcgaaggcgcagggggtc
ccggcctacatcgtcttcggcgacgcgaccctccgcgctgtcgccgcggcccggcccgcg
agcctcggcgagctggacggcatcaccggaatcggcgcgaagaagcgggaagcctatggg
caggcactgctggatgtggtggccgggcgcgagtag
DBGET
integrated database retrieval system
