Leifsonia xyli subsp. cynodontis DSM 46306: O159_05550
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Entry
O159_05550 CDS
T02852
Name
(GenBank) ATP-dependent DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lxy
Leifsonia xyli subsp. cynodontis DSM 46306
Pathway
lxy03420
Nucleotide excision repair
lxy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
O159_05550
03430 Mismatch repair
O159_05550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lxy03400
]
O159_05550
Enzymes [BR:
lxy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O159_05550
DNA repair and recombination proteins [BR:
lxy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O159_05550
MMR (mismatch excision repair)
Other MMR factors
O159_05550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ATP-synt_ab
AAA_22
PAC4
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
17047655
NCBI-ProteinID:
AGW40750
UniProt:
U3P354
LinkDB
All DBs
Position
521224..523773
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AA seq
849 aa
AA seq
DB search
MTVEAAKIVSDMTSLPDAPSPSAVPIVLDGWEGDRRSAVGTGAADADGAPGAAWLNASQR
LFDGLNPQQRIAAEYRGQALLIVAGAGSGKTSVLTRRIAGLIESREAWPSEILAITFTNK
AANEMRERVEQLLGGRAQGMWISTFHSACVRILRREAETIGKTQSFTIYDSGDSRALLKR
IIKELSADALGVTVASAGGRISKLKNELTDLETFARTADLSDPKEVMFVEIFRQYTRELR
RANAFDFDDLIVETVFLFRAFPKVAALYQSRFRHILVDEYQDTNHAQYALIRELTMPIAA
DIADELEANGRAIGKLRDAVGVVPSASLTVVGDSDQSIYAFRGADIRNIVEFERDFPGAR
VVLLEQNYRSTQNILSAANAVIANNFDRKDKKLWTAVGDGEKIVGYTGYSGHDEAQFVAD
EIERLHSGGMDYKDIAVFYRTNAQTRALEEIFIRSALPYRVMGGTKFYERAEIKDAMGYL
IAVANPADMLALRRILNTPKRGIGPATETQLASYADDNGIAFRDAMRDAGSLGLGPKVTG
AILQLSALLDDATAKADPANPAGVAPVPDILTFLLDGSGYLDVLRNSRDPQDEARAENVE
ELVAVTREFVRNNPDGTLVDFLTEVSLVAAADEIDDSSGSVSLMTLHTAKGLEYDAVFLT
GIEEDLLPHRMSANEPGGPAEERRLFYVGITRAKKRLFLSLAMTRAQFGETAVAMPSRYL
QEIPSDLIDWRQSPGAANGRGGSQSRALNARRLGLGSGGTAGRWNESFPVGGSGVPERPK
AEWPNRVTGKVRDNGDLVLAPGDRIRHSDFGEGRVTTVTGEGAKRVAHVQFEKAGAKKLL
IKIAPIEKL
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggaggcggctaaaatcgtcagcgatatgacgagcctccccgatgccccttcc
ccctccgccgttccgatcgtcctggacgggtgggagggcgaccgccggtccgccgtcggc
accggcgcggccgatgcggacggggctccgggcgcagcctggctgaatgcgagccagcgg
ctgttcgacggtttgaacccccagcagcgcatcgcggcggagtatcgcggccaggcgctt
ctcatcgtcgcgggagcggggtccggcaagacgagcgtcctcacccggcgcatcgccggc
ctgatcgagagccgggaggcgtggccgagcgagatcctcgcgatcacgttcaccaacaaa
gcggcgaacgagatgcgcgagcgcgtcgagcagctgctgggcgggcgagcgcaggggatg
tggatctccacgttccactcggcgtgcgtgcgcatcctccgccgcgaggccgagaccatc
ggcaagacccagagcttcaccatctacgattccggcgacagtcgcgcgctgctgaaacgc
atcatcaaggagctgagcgccgacgccctcggcgtcaccgtcgcgagcgccggcggccgg
atctccaagctcaagaacgaactcaccgacctcgagaccttcgcccgcaccgccgatctg
agcgacccgaaagaggtgatgttcgtcgagatcttccgccagtacacacgggagctgcgg
cgcgccaatgcgttcgatttcgatgacctcatcgtcgagacggtcttcctcttccgtgcc
ttcccgaaggtcgcggcgctctaccagtcccggttccggcacatcctggtggacgagtac
caggacacgaatcacgcgcagtacgcgctcatccgtgagctgaccatgccgatcgccgcc
gatatcgcggacgaactggaagcgaacggccgcgccatcggcaagctgcgggacgccgtc
ggcgtcgtcccgagcgcgtcgctcaccgtcgtcggcgactccgaccagtccatctacgcc
ttccgcggtgcggacatccgcaacatcgtggagttcgagcgcgacttccccggggccagg
gtcgtcctgctggagcagaactaccggtccacgcagaacatcctgagcgccgcgaacgcc
gtcatcgccaacaacttcgaccgcaaggacaagaagctgtggaccgccgtcggcgacggc
gagaagatcgtcgggtacacgggatactccggccacgatgaggcgcagttcgtcgcagac
gagatcgagaggctgcactccggcgggatggactacaaagacatcgccgtcttctaccgc
accaacgcccagacgcgagcgctggaggagatcttcatccgttcggccctgccctacaga
gtcatgggcggcacgaagttctacgagcgcgcggagatcaaggatgcgatggggtatctc
atcgccgtcgccaacccggccgatatgctcgctctgcgccgcatcctgaacaccccgaag
cgcggcatcggaccggccaccgagacccagctcgccagttatgccgacgacaacgggatc
gcgttccgcgatgccatgcgcgacgccggttcgctcgggctcggtcccaaggtgaccggc
gccatcctgcagctgtcggctttgctggacgacgcgaccgccaaggccgacccagcgaat
cccgcgggagtcgcgccggtgcccgacattctgaccttcctgctcgacggcagcgggtac
ctcgacgtgctgcgcaacagccgcgacccgcaggacgaagcgcgtgcggagaacgtggag
gagctcgtggccgtgacgcgcgagttcgtgcgcaacaacccggacgggacgctggtcgac
ttcctcaccgaggtctccctcgtggccgcagccgatgagatcgacgactccagcgggtcc
gtctcactcatgacgctgcacaccgccaagggcctcgaatacgatgccgtgttcctcacc
ggcatcgaggaggatctgcttccccaccggatgtccgcgaacgagccgggcggcccggcg
gaggagcggcgcttgttctacgtgggcatcacccgcgcgaagaagcgtctgttcctgtcg
ctggcgatgacacgcgcgcagttcggcgagaccgccgtggcgatgccgagtcgttacctg
caagagatcccctccgatctgatcgactggcggcagtcgcctggcgccgcgaacggccgt
ggcgggtcgcagtcgcgtgcgctcaacgcgcgccgtctggggctcggctccgggggcacg
gccgggcgctggaacgagagtttcccggtcggcggctcgggcgtcccggagcggccgaag
gcggaatggccgaaccgggtcaccggcaaggttcgcgacaacggcgaccttgtgctggcg
ccgggcgaccgcattcgccactccgacttcggcgagggccgcgtgaccaccgtgaccggc
gagggagcgaagcgcgtcgcgcacgtccagttcgagaaggcgggcgcgaagaaactcctc
atcaagatcgccccgatcgagaaactgtga
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