Leifsonia xyli subsp. cynodontis DSM 46306: O159_10920
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Entry
O159_10920 CDS
T02852
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
lxy
Leifsonia xyli subsp. cynodontis DSM 46306
Pathway
lxy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lxy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
O159_10920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lxy03019
]
O159_10920
03009 Ribosome biogenesis [BR:
lxy03009
]
O159_10920
Messenger RNA biogenesis [BR:
lxy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
O159_10920
Ribosome biogenesis [BR:
lxy03009
]
Eukaryotic type
Pre-60S particles
RNases
O159_10920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
17048099
NCBI-ProteinID:
AGW41194
UniProt:
U3P6V6
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All DBs
Position
1029574..1030155
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AA seq
193 aa
AA seq
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MTGLDPAVDELVEIAVVITDFDLNVLDPGLSIVIKPDASALATMNDFVREMHTASGLMEE
IPGGVSLAEAEYEVLEYVLRFAPAARTAPLAGNTIGTDRMFLAKHMPRLDTHLHYRNVDV
SSIKELARRWFPRVYFNAPEKNGGHRALADILESVRELDYYRRAAFVAEPGPTTEETQTA
SATIVEKWTARMG
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtctcgacccggcggtcgacgaactggtcgagatcgcagtggtcatcaccgat
ttcgacttgaacgtcctcgacccggggctgagtatcgtcatcaagccggatgcctccgca
ctggccactatgaacgacttcgtccgcgagatgcacaccgcgtcgggtctcatggaggag
atccctggcggtgtcagtctcgcggaagcggagtacgaggtgctcgagtacgtcctgagg
ttcgcaccggctgcccgcacggccccgctcgccgggaacaccatcggcaccgaccggatg
ttcctcgccaagcacatgccgcgcctggacacgcatctccactaccgcaacgtcgatgtc
tcctcgatcaaggagctggctcgccgctggttcccccgtgtctacttcaacgcacccgag
aagaacggcggccaccgcgccctcgccgatatcctcgagtcggtccgcgagctcgactac
taccgcagagcggccttcgtcgcggagcccgggccaacgacggaggagacacagacggcc
tccgcgaccatcgtggaaaaatggaccgcccgaatgggctag
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