Leifsonia xyli subsp. cynodontis DSM 46306: O159_16200
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Entry
O159_16200 CDS
T02852
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lxy
Leifsonia xyli subsp. cynodontis DSM 46306
Pathway
lxy03030
DNA replication
lxy03430
Mismatch repair
lxy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O159_16200
03430 Mismatch repair
O159_16200
03440 Homologous recombination
O159_16200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lxy03032
]
O159_16200
03400 DNA repair and recombination proteins [BR:
lxy03400
]
O159_16200
Enzymes [BR:
lxy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
O159_16200
DNA replication proteins [BR:
lxy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
O159_16200
DNA repair and recombination proteins [BR:
lxy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
O159_16200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
Motif
Other DBs
NCBI-GeneID:
17048574
NCBI-ProteinID:
AGW41669
UniProt:
U3P873
LinkDB
All DBs
Position
complement(1547319..1550834)
Genome browser
AA seq
1171 aa
AA seq
DB search
MADSFVHLHVHSEYSMLDGAARVKPLIDAAVEQRMPAVAVTDHGNMFGAFDFWRTATDAG
IKPIIGTEAYLTPGTHRTDKTRIRWGDGGGDDVSGSGAYTHMTLLAATTEGMHNLFRMSS
LASIEGYYFKPRMDRELLSQYAKGIIATTGCPSGEVQTRLRLGQYEEAKKAAAEFRDIFG
KENFYAEIMDHGLGIERRIMADLIRLAKELGLPLVATNDLHYTHAADAKSHAVLLCVQSG
STLDDPNRFKFDADEFYLKSSEQMRQLFRDHPDACDNTLAIAERVDVRFDTAANYMPRFP
VPAGETEQTWFVKEVERGLAERYPNGVTPAVRKQADYEIGVISQMGFPGYFLVVADFINW
SKDNGIRVGPGRGSGAGSMAAYAMRITDLDPLQHGLIFERFLNPDRVSMPDFDVDFDDRR
RGEVIKYVTDKYGEERVAQIVTYGTIKAKQALKDSSRVLGFPFGMGEKLTKAMPPPVMGK
DIPLTGIFDKQHPRYKEALDIRAVVESDPEAKTVFDTALGLENLKRQWGVHAAGVIMSSD
PLIDVIPIMKREQDGQIVTQFDYPACESLGLIKMDFLGLRNLTIINDALDNIEANRREKL
VLENLELDDRAAYELLSRGDTLGVFQLDGGPMRSLLRLMKPDNFEDISALIALYRPGPMG
ANSHTNYALRKNGQQEITPIHPELAQPLEDILSTSYGLIIYQEQVMAIAQKVAGFSLGQA
DILRRAMGKKKKSELDKQFEGFSQGMVENGYSMEAVNKLWEILLPFSDYAFNKAHSAAYG
VISYWTAYLKAHYPAEYMAALLTSVGDSKDKMALYLNECRRMGIKVLPPDVNESSLYFAA
VGEDIRFGMGAVRNVGANVVEGVREARESSGRFESFHDFLGKVPVHAANKRTVESLIKAG
AFDSLGYTRRALVEVHEDAVESAVKIKRSEANGDIGFDFDSLWGDDEQNRSQHHIPERPE
WVKRDKLAFEREMLGLYVSDHPLAGLELHLAKLASTSIADLVASETVQDGETVVIAGLVT
SVQHRVAKASGNQYGMIQVEDFGGEMTAMFMGKAYQEFSGLLQGDSIVVVRGRVSLRDDG
MNLHAFSLMVPDLGQADDVGTVTITMPDHRATTDTVTELASVLTRHPGESEVRLRLVKGS
VARVFEVPKPVKVSPDLYGELKGLLGPNCLV
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggccgactccttcgttcacctccacgtccacagcgagtactcgatgctcgatggcgcg
gctcgcgtcaaaccgctcatcgacgccgcggtggagcagaggatgcccgccgtcgcggtc
accgaccacggcaacatgttcggcgcgttcgacttctggcgcaccgccaccgacgccggg
atcaaaccgatcatcggcaccgaggcgtacctcacgccgggcacacaccgcaccgacaag
acccggattcgctggggggacggcggcggggacgatgtctccggctccggtgcctacacg
catatgaccctgctcgctgcgacgaccgaggggatgcacaacctcttccggatgtcctcg
ctggcctccatcgagggctactacttcaagccgcggatggaccgcgagctgctcagccag
tacgccaagggcatcatcgcgacgacgggctgcccctccggagaggtccagacccgcctc
cggctcggccagtacgaggaggccaagaaagccgccgccgagttccgcgacatcttcggc
aaggagaacttctacgccgagatcatggatcacggtctcggcatcgagcgccggatcatg
gccgacctcatccggctggcgaaggagctcggcctcccgctggtggccaccaacgacctc
cactacacgcacgccgccgacgcgaagagtcacgcggtgctgctctgcgtccagtccggc
tcgaccctcgacgaccccaatcggttcaaattcgacgcggacgagttctacctgaagtcg
tccgagcagatgcggcagctcttccgcgatcacccggacgcctgcgacaacacgctcgcg
atcgccgagcgggtggatgtgcggttcgacaccgccgccaactacatgccgcgcttcccg
gtcccggccggtgagaccgagcagacctggttcgtcaaggaggtcgagcggggtctggcc
gagcgttacccgaacggtgtcaccccggcggtgcgcaaacaggccgactacgagatcggc
gtcatctcgcagatgggcttccccggctacttcctcgtcgtcgccgacttcatcaactgg
tcgaaggacaacggcatccgggtgggccccggccgcggttccggcgcgggctcgatggcg
gcctacgcgatgcggatcaccgacctcgacccgttgcagcacggcctcatcttcgagcgc
ttcctcaaccccgaccgcgtctccatgcccgacttcgacgtcgacttcgacgaccgtcgc
cgtggcgaggtcatcaagtacgtgaccgacaagtacggcgaggagcgtgtcgcccagatc
gtcacgtacggcaccatcaaggccaagcaggccctcaaggactcctcgcgcgtgctcggg
ttcccgttcgggatgggcgagaagctgacgaaggcgatgccgccgcccgtcatgggcaag
gacatcccgctcaccgggatcttcgacaaacagcacccgcgctacaaggaggccctggac
atccgcgccgtcgtggagtccgatcccgaggccaagaccgtgttcgacacagcgctcggc
ttggagaacctgaaacggcagtggggcgtccacgcggccggcgtgatcatgtcctcggac
ccgctcatcgacgtcatcccgatcatgaagcgggagcaggacggccagatcgtcacacag
ttcgactacccggcctgcgagtccctcggcctgatcaagatggacttcctgggcctcagg
aacctgacgatcatcaacgacgcgctcgacaacatcgaggcgaaccgccgcgagaagctc
gtgctggaaaacctggagctggacgaccgcgccgcctacgaattgctctcccgcggtgac
acgctcggcgtgttccagctcgacggcggaccgatgcgctcgctgctgcgcctgatgaaa
ccggacaacttcgaggacatctcggccctcatcgcgctgtatcggcccggccccatgggc
gcgaactcgcacaccaactatgcgctgcggaagaacgggcagcaggagatcacgcccatc
catcccgagctcgcgcaaccgctggaggacatcctctccaccagctacggcctgatcatc
taccaggagcaggtcatggccatcgcgcagaaggtcgcgggcttctcgctcgggcaggcc
gacattctgcgccgtgcgatgggcaagaagaagaaatcggaactggacaagcagttcgag
ggcttctcacagggcatggtcgagaacgggtactcgatggaggccgtgaacaagctctgg
gagatcctgctcccgttctccgactacgcgttcaacaaggcgcactcggctgcctacggg
gtcatctcgtattggaccgcctatctcaaggcccactatccggccgagtacatggcggcg
cttctcacgagcgtcggcgactccaaggacaagatggcgctgtacctcaacgagtgccgt
cgcatgggcatcaaggtgctcccgcccgacgtcaacgagtccagcctgtatttcgcggcc
gtcggcgaggacatccgcttcgggatgggcgctgtgcgcaacgtcggcgccaacgtggtc
gagggcgtccgggaggcgcgggagtcgagcggccggttcgagtcgttccacgacttcctc
ggcaaagtgcccgttcacgccgccaacaagcgcactgtcgaatcgctcatcaaggccggc
gctttcgactcgctgggctacacccgccgggcgctggtggaggtccacgaggatgcggtg
gagtctgcggtcaagatcaagcgcagcgaagccaatggcgatatcgggttcgatttcgat
agtctgtggggggacgacgagcagaaccggtcgcagcaccacatccccgagcgcccggag
tgggtcaagcgcgacaagctcgcgttcgagcgcgagatgctcggcctgtacgtctccgac
caccctcttgcggggctggaactgcacttggcgaagctcgcgagcacgtcgatcgccgac
ctcgtcgcctcggagactgttcaggacggcgagaccgtcgtcatcgcgggtctcgtgacc
agcgtccagcaccgtgtcgcgaaagcctccggcaatcagtacgggatgatccaggtcgag
gatttcggcggtgagatgaccgccatgttcatgggcaaggcgtatcaggagttctcgggt
ctgctgcagggcgactcgatcgtcgtcgtgcgcggtcgcgtgagcctgcgcgacgacggt
atgaacctgcacgcgttcagcctgatggtcccggacctcggccaggccgacgacgtcggg
accgtgacgatcaccatgccggaccaccgggcgaccaccgacacggtcactgagctcgcg
tccgtcttgacccgccacccgggtgagagcgaggtgcggctgcgactcgtgaaaggctcg
gtcgctcgcgtgttcgaggtgccgaagccggtgaaagtgtcgcccgacctctacggggag
ctcaaagggctgctgggcccgaattgcctggtgtga
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