Leifsonia xyli subsp. cynodontis DSM 46306: O159_21830
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Entry
O159_21830 CDS
T02852
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lxy
Leifsonia xyli subsp. cynodontis DSM 46306
Pathway
lxy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
O159_21830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lxy03400
]
O159_21830
Enzymes [BR:
lxy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
O159_21830
DNA repair and recombination proteins [BR:
lxy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
O159_21830
Prokaryotic type
O159_21830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
C2-set_2
Motif
Other DBs
NCBI-GeneID:
17049064
NCBI-ProteinID:
AGW42159
UniProt:
U3P9F5
LinkDB
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Position
complement(2054346..2055038)
Genome browser
AA seq
230 aa
AA seq
DB search
MPKSLAELAADGSMDPGWAEALAPVADRIAAMGDFLRAEVAAGRPYLPAGANVLRAFRAP
LADVRVLIVGQDPYPTPGHPIGLSFAVERQVYPLPRSLQNIYQELRDDLGLASPPHGDLS
AWSGNGVMLLNRVLTVRPGAPASHRGKGWEPITEHAIRCLVARGRPFVSILWGRDASTLK
PLLGGNPAIESPHPSPLSASRGFFGSKPFSRANALLERVGEKPVDWALSP
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaatctctcgccgaactcgccgcagacgggtcgatggacccgggctgggccgag
gctctcgcccccgtcgccgatcgcatcgccgcaatgggcgatttcctccgcgcggaggtc
gcggccggccggccgtacctgcccgccggagccaacgtcctgcgcgccttccgcgcgccg
ctcgccgatgtgcgggtcctcatcgtcggccaggacccgtaccccacccccgggcatccc
atcggcctctcgttcgccgtcgagcggcaggtgtacccgctgccgcggagccttcagaac
atctaccaggagctgcgcgacgacctcggcctcgcatcgcccccgcacggcgacctgagc
gcgtggtcgggcaacggggtcatgctgctcaaccgggtcctcaccgtccggccgggggcg
ccggcctcgcaccggggcaaggggtgggagccgatcaccgagcatgccatccgctgcctc
gtcgcccgggggcggccgttcgtcagcatcctgtgggggcgggacgcctcgacgctgaag
ccgctcctcggtggcaacccggcgatcgagtcgccccacccgagtccgctctcggcgtcg
cgcgggttcttcgggtcgaagccgttctcccgtgcgaacgcgctgctggagcgggtgggg
gagaaaccagtcgactgggcgctgtcgccgtaa
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