Leifsonia xyli subsp. cynodontis DSM 46306: O159_27540
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Entry
O159_27540 CDS
T02852
Name
(GenBank) fibronectin-like protein
KO
K20276
large repetitive protein
Organism
lxy
Leifsonia xyli subsp. cynodontis DSM 46306
Pathway
lxy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lxy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
O159_27540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
fn3
Motif
Other DBs
NCBI-GeneID:
17049550
NCBI-ProteinID:
AGW42645
UniProt:
U3P8N6
LinkDB
All DBs
Position
complement(2566663..2571696)
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AA seq
1677 aa
AA seq
DB search
MFTAAAKPETRTVRFGGGTGKTGAVQVSPVGGRPSVYDAASGELWLDGRTVRLGAHIPEP
ASARLATPVTDSGRLLIAHSRGVLAVHAETGEVTAIGHDPRATGTAARPSRVDGCDYAAW
SGGVGYELCGSSLRVVVLDEMVGAAPAILANGRRAVVSDAATGRAWAIQRDGALIDNWED
FTAEDRERHPRQDARDTPPEIDSVAAAPLAQDDEFGARAGRVTSFPVLLNDTDPNGDLLA
LTALTPLPDWFGRLDIVENAQKLQLTATPEAMGTQTVRYTIDDGNGGTAAADVVITIVPP
GQNSPPVQVRTTRTSVANGGMTRIAALDDWVDPDGDPIFLADAQAAAPGRVSFTPAGEVQ
YTDDGTQPGLSTVPLAVSDGTATGNGSLAVTAGAPGTVPIIAGSFTLTGFAGQPVAVAPL
PNVRGGTGELMLAGVTESGGGSVTITPDYAAGTFVARAPAAGDYELTYTAGDGDQNASGR
VRLRLSDPPEATLPPVTQPVTVYASLRQTQQVEALAGDVDPAGGVLGITAVDGVPDELAV
GVLDESRVSLALTRPLSDRPVSFQYTVSNGSSSAPGTITVVQVPEPLQLQPPVAMPDEVT
VRVGEVADIPVLANDSQPDGKPLILGSELVKELPPGAGALFASGDRLRYLAPLKPGTFRS
AYSVSTTDGQTAIGQVTITVRDAASSDNRPPLPLTVTAHATAGEMVRIPIPLTGIDPDGD
TVTLGGQTGAPRLGAVSGVGADSIDYTPGPFAAGTDEFQYTVVDALGAQATGLVRVGVLP
PTEAVQPPVAVDDAVAVRPGSPLKVDVTQNVSDPQGGTLTVAAAEGADGLVATHGKKTIE
LTAPATSGAAAVLYTVRNPRGGTASAWLYLDVRADAPLAAPVASDVRVPLTAVDGKQTVA
VDALGSVTFSEGGTSALTLRVHDGFPTASVSGDRVRVKVRPRSQVIPYTVARKDDPSVSA
TAFVWVPGYEDAAPERRTDAPQLTTTSGEPLTIRIGDYVVAAAGRKARIVDAASVTATYS
DGQPLVVDETTLRYTPAKEYFGPASITFTVSDREGADGNRATFTLPISVAPHKSQPPALR
GTALRVEPGGHTAVDLRALTESGAGSSRGAVSYTVDPVTHEGVTSGLNGSTLTVSADDRA
PVGSVAAFTVTPRDRNGAGTAGQITVAVVRSTRPLAAPADDTLVLRRGASDTVDVLRNDQ
PTNPFPGKPLRVVALDTSALPPGIAVSGWSATGRVTVSVGAGVPVGTFSVPYTVADATDD
PARRMSATLRLMVQDVPGTPSAPPVVLDHDVAAASVTLGMPPVTSNGSAVTSFIVRSTSG
DIQQRCSARRLCEVRGLTFGVGYQFTAAAVNGVGDGPASPPSEVVVVDGTPAAPASVQLT
PGTTVRDGSAMTLSWSAVDDPAHGSAIRSYAYSVQGPDGVVATGETIGAQATNATIASSA
LRPGQYYTATVQARNLSSLGPSATGGAVAAPSFTASPQVARSVEQGRAQVSWMAEFGGGS
FGYAVVSRGGGQVCDGKNPGSGAAAGSSPYTDPESPIATDYTVFLVNEAFCTAATTNILD
LQSAGFADPSLSLLPDAGGSPQWTLGGIATTGYVSSCEVAVVPVGTAPSAAWRSIPCAAE
NRAGGESVLTGPQLTDPARVYDVWVRVNGWDSPVARLVRSGLVPPALTTIPKEGTAP
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaccgcggcggccaagccggagacgcgcacggtgcgattcggcggcgggacgggc
aagacgggggctgtccaggtctcgcccgtgggcggccggccttcggtgtacgacgccgct
tcgggcgaactgtggctggacgggcgcacagtgcggctcggtgcgcacatcccggagccg
gcttccgcgcggctcgccacgcccgtcaccgacagtggccggctgctgatcgcccactcg
cggggggtgctcgccgtccacgccgagaccggcgaggtcaccgccatcggccacgacccg
cgggcgacgggcaccgctgcgcggccgtcgcgggtggacggctgcgattacgcggcctgg
tcgggcggtgtcgggtacgaactctgcgggtcgtccttgcgggtcgtcgtgctcgacgag
atggtcggcgcggctcctgcgatcctcgcgaacggacgccgggcggtcgtcagcgacgcc
gcgaccgggcgggcgtgggcgatccagcgcgacggcgccctcatcgacaactgggaggac
ttcaccgcggaggacagagagcggcacccgcggcaggacgcgcgggacacgcctccggag
atcgacagcgtcgctgctgcgcccctcgctcaggatgacgagttcggcgcgcgggcgggg
cgtgtgacctcgtttccggtgctgctgaacgacacggacccgaacggggacctgcttgcg
ctcaccgcgctcacgccgctgccggactggttcgggcgtctcgacatcgtggagaacgcg
cagaaactacagctgacggcgacgccggaggcgatggggacgcagaccgtgcgctacacg
atcgacgacgggaacggagggacggcggcggcggacgtggtcatcacgatcgtgccgccc
gggcagaacagcccaccggtccaggtgcgcacgacccggacgtccgtcgccaacggaggc
atgacccggatcgccgcgctggacgactgggtggaccccgacggcgacccgatcttcctg
gccgacgcgcaggcggcggcccccggccgcgtgtccttcaccccggcaggcgaggtccag
tacaccgatgacgggacgcagccgggactcagcactgtgccgctggccgtgtccgacggc
acagcgacgggcaacggctccctcgcggtcacggccggtgctccgggcacggtgccgatc
atcgccggctcgttcaccctgaccgggttcgcggggcaaccggtcgcggtcgcgcccctg
ccgaacgtgcgcggcggcaccggggagctgatgctcgccggggtgaccgagtcgggtgga
ggctcggtcacgatcaccccggactatgcggcggggaccttcgtcgcgcgggccccggcc
gcgggcgactacgagctgacctacaccgctggcgacggcgaccagaacgcgagcggccgg
gtgcggctgcggctgagcgatccgccggaagccaccctgccgccggtgacgcagccggtg
accgtctacgcctcgctgcggcagacacagcaggtggaggcgctggccggggacgtcgat
ccggcgggcggcgtgctggggatcaccgctgtggacggcgtcccggacgagctcgcggtc
ggtgtgctggacgagagccgggtctccctcgccctcacccgccccctgagcgataggccg
gtgagcttccagtacaccgtgagcaatggcagctcgagcgctcccgggacgatcacggtc
gtccaggttccggagccgcttcagttgcagcccccggtcgcgatgccggacgaggtgacg
gtgcgggtgggcgaggtggcggacatcccggtgctcgcgaacgactcgcagccggacggc
aaaccgctgatcctcggctcggagctggtcaaagagctgccgccgggagccggcgccctc
ttcgcgtccggtgaccggctgcgctatctcgccccgctcaaaccgggcaccttcaggtct
gcctactcggtgagcacgacggatgggcagaccgcgatcggccaggtgaccatcacggtc
cgggatgcggcgtcgtcggacaaccggcctcctctgccgctcaccgtgacggcccacgcg
acagctggcgagatggtccgcatcccgatcccgctgaccggcatcgaccccgacggggac
acggtgacgctcggcggccagacgggcgcaccgcggcttggcgcggtctccggcgtcggc
gccgactccatcgactacacgccgggtcctttcgcggcgggcacggatgagttccagtac
acggtggtggacgcgctgggcgcccaggcgacgggactggtgcgcgtcggcgtcctgccg
ccgaccgaggcggtgcagccgcccgtggcggtggacgacgcggtcgcggtccggccgggg
tcgcccctgaaggtcgatgtgacgcagaacgtcagcgacccgcagggcggcacgctgacg
gtcgccgccgccgagggcgcggacggtctggtggcgacgcacgggaagaagaccatcgag
ctgacggccccggcgacgtcgggcgcggcggctgtgctgtacacggtccgcaacccgcgc
ggcggcacagccagtgcgtggctgtatctggatgtgcgggcggacgccccgttggcggcc
ccggtcgcctccgatgtccgtgtgccgctcacggcagtggacggcaagcagaccgtcgcc
gtggacgccctcggctcggtgaccttcagtgagggcgggacctccgcgctgacgctgagg
gtacacgacggcttcccgaccgcgagcgtgtccggggaccgggtgcgggtgaaggtgcgg
ccccggagccaggtcatcccgtacacggtcgcgcgcaaggatgacccgtccgtcagcgcg
acggcgttcgtctgggtcccggggtacgaggacgcggccccggagcgccggacggacgcg
ccgcagctgacgacgacgagcggtgagccgctgacgatccgcatcggcgactatgtggtc
gccgcagccggacgcaaagcgcggatcgtggacgcggcgagcgtcacggcgacgtactcg
gacggacagccgctggtcgtggacgagacgaccctccggtacacgccggcgaaggagtac
ttcggcccggcctccatcactttcacagtgtccgatcgggagggggctgacggcaaccgg
gcgacgttcaccctcccgatctccgtcgccccgcacaagagccagccgcccgccctgcgc
ggcaccgcgctccgtgtggagccgggcgggcacaccgctgtcgacctccgcgccctcacc
gagagcggggcgggttcgtcgcggggcgccgtctcctacacagtggacccagtgacgcac
gagggcgtcacctccggtctcaacggatcgacgctcacggtgagcgccgacgaccgggcg
cctgtcgggtcggtggccgcgttcaccgtcacaccgcgcgatcggaacggagcggggacg
gccgggcagatcactgtcgccgtggtgcgttccacacggcccctcgcggcgcccgcggac
gacacgctggtgctgcggcgcggcgcatcggacacggtggatgtgctgcgcaacgaccag
ccgacgaaccccttccccggcaaaccgctgcgggtcgtcgctctcgacacctcggcgctg
cctccggggatcgcggtgagcggctggtctgcgaccgggcgcgtcaccgtctcggtgggc
gctggagtgccggtcgggacgttcagcgtcccgtacaccgtcgccgacgccaccgacgat
ccggcgcgccgcatgtctgcgacgctgcgtctgatggtccaggatgtgccgggcacgccc
tcggcgccgcccgtggtgctcgaccatgacgtcgctgcggcgtcggtgacgctcgggatg
ccgccggtgacctccaacgggtcggcggtgacctccttcatcgtccgttcgacgagcggc
gacatccagcagcggtgcagcgcgaggcgcctctgcgaagtgcgcggtctgacgttcggc
gtgggctaccagttcaccgcggcggccgtgaacggcgtcggcgacgggccggcgagtccg
ccgagcgaggtggtcgtggtcgatgggactcccgccgcgccggcgtccgtccagctcaca
ccgggcaccaccgtcagggacggcagtgcgatgacgctctcctggagcgcggtcgatgac
ccggcgcacgggagcgcgatccgttcgtacgcgtactcggtccagggcccggacggagtg
gtagcgacgggcgagaccatcggcgcccaggcgaccaacgcgacgatcgcttccagcgct
ctgcggcccggccagtactacacggcgaccgtccaggcgcggaacctgtcgagcctcggg
ccgtcggcgaccggtggcgcggtcgcggcgccgagctttaccgcgtccccgcaggtggcc
cggtccgtcgagcaggggcgggcgcaggtgagctggatggccgagttcgggggcggctcg
ttcgggtacgctgtggtctcgcgcggtggcgggcaggtctgcgacgggaagaaccccggc
tcgggcgccgcggcgggaagctcgccctacaccgatccagagtcccccatcgcgaccgac
tacaccgtgttcctggtcaacgaggccttctgcacggcggcgaccacgaacatcctcgat
ctccagtccgccgggttcgccgacccctcgctctcgttgctccccgacgccggaggctcc
ccccagtggacgctcggcggcatcgcgaccacggggtatgtgtcctcgtgcgaggtcgcg
gtcgtgccggtcgggacggcgccctcggccgcctggcgcagcatcccgtgcgcggcggag
aaccgggcgggcggggagagcgtcctgaccggaccgcagctcaccgacccggccagggtc
tacgacgtctgggtgcgggtgaacgggtgggactcgcctgtcgcccgcctcgtccgcagc
gggctcgttccgccggccctgaccacgatcccgaaggaaggaaccgcaccgtga
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