Lysobacter yananisis: RDV84_00525
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Entry
RDV84_00525 CDS
T09342
Name
(GenBank) TonB-dependent siderophore receptor
KO
K16090
catecholate siderophore receptor
Organism
lya
Lysobacter yananisis
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lya02000
]
RDV84_00525
Transporters [BR:
lya02000
]
Other transporters
Pores ion channels [TC:
1
]
RDV84_00525
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
WMT03375
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Position
101968..104268
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AA seq
766 aa
AA seq
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MSPTKFVVSPLAGALALAISLPTLAAPAPAPQAKDVEGVEVHGQRIQKASSGKYTANLRD
TPQTVTVIDRNTIDGQNLLSLQDILSTLPGITFGAGEGGGGFGDKINLRGFDATNDITVD
GVRDSGMYSRTDPFNLESVEVINGANSVYSGAGSVGGTVNLVSKSAGLNEFHKASIAAGT
DAYARFTSDSNFVLGEGTALRLNTMAHQNDVPGRDVEDNQRWGVAASLGFGLGSDTSWTL
SYLHQSDDNTPQYGLPFFNGDVLPGIDRGNYYGYSNIDRQEVELDSLTSVIDHSFNERFK
LRNLTRWQQVDQFSLVDAVQGTWCLANGVTPTGAACGATRPGNYSPSGPRGYGRDTRNTT
IYNQTDLTLSFNTGAIEHNLVAGFSILHEKFDLDVTSDFRNPNGTNPFLAGLPQMNIANP
DHIYRGPLNRTLTGRTEGELDNRALYVFDTLKFNEQWQLSLGARYERNEGKTNSAVVVQA
PTAANQPLPAQPIGTVTGYGVPTKSNDDLFSYRAGLVFKPVENGSVYIAYGNSKTPSKAS
VNGSCTPQNCSVDPETAVSYELGTKWDFLDGRLALTGSVFRNDRKNYKVADPANPLNPSG
LQQLDGRARVDGVMLGLSGLLTDHWAVYANYAFLDSEVLRGVSNRQAQLGQDFTKGDRLL
SVPEHSFSLWTTYDLSPKWQIGYGATYQGKIWLTQHSATNVNGPLTTYGSYWTHRAMVAY
KISRQAQLQLNVNNLSDEEYFTRIRNNGWATPGDGRQVVLSANFSF
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccacgaagttcgtcgtgtcgccgctcgccggcgcgctcgccctcgccatcagc
ctgcccaccctcgccgcccccgctccggccccccaggccaaggacgtcgaaggcgtcgaa
gtgcacggccagcgcatccagaaggccagcagcggcaagtacaccgcgaacctgcgcgac
accccgcagacggtcaccgtgatcgaccgcaacaccatcgacggccagaacctgctgtcg
ctgcaggacatcctcagcaccctgccgggcatcaccttcggcgccggcgagggcggcggc
ggcttcggcgacaagatcaacctgcgcggcttcgacgccaccaacgacatcaccgtcgac
ggcgtgcgcgacagcggcatgtacagccgcaccgatccgttcaacctggaatcggtggaa
gtgatcaacggcgccaactcggtctattccggcgccggctcggtcggcggcaccgtcaat
ctggtcagcaagtccgccggcctcaacgagttccacaaggcctccatcgccgccggcacc
gacgcctacgcgcgcttcaccagcgacagcaacttcgtgctcggcgaaggcaccgcgctg
cgcctgaacaccatggcgcaccagaacgacgtgccgggccgcgacgtcgaggacaaccag
cgttggggcgtggccgcctcgctcggcttcggcctgggcagcgatacgtcgtggaccctg
agctatctgcaccagagcgacgacaacaccccgcagtacggcctgccgttcttcaacggc
gacgtgctgccgggcatcgaccgcggcaactactacggctacagcaacatcgaccgccag
gaagtcgagctcgattcgctgacctcggtgatcgaccacagcttcaacgagcgcttcaag
ctgcgcaatctgacccgctggcagcaggtcgaccagttctcgctggtcgacgcggtgcag
ggcacctggtgcctggccaacggcgtcaccccgaccggcgccgcctgcggcgcgacccgc
ccgggcaactacagcccgagcggcccgcgcggctacggccgcgatacgcgcaacaccacg
atctacaaccagaccgacctgacgctgagcttcaacaccggcgcgatcgagcacaacctg
gtcgccggcttctcgatcctgcacgagaagttcgacctcgacgtcaccagcgacttccgc
aaccccaacggcaccaacccgttcctggcgggcctgccgcagatgaacatcgccaacccg
gaccacatctaccgcggcccgctcaaccgcaccctgaccgggcgcaccgagggcgaactc
gacaaccgcgcgctgtacgtgttcgatacgctcaagttcaacgagcagtggcagctgagc
ctgggcgcgcgctacgagcgcaacgagggcaagaccaacagcgccgtcgtcgtgcaggcg
ccgaccgccgccaaccagccgctgccggcgcagccgatcggcaccgtcaccggctacggc
gtgccgaccaagagcaacgacgacctgttctcctaccgcgccggcctggtgttcaagccg
gtcgagaacggcagcgtctacatcgcctacggcaattccaagaccccgtcgaaggcctcg
gtcaacggttcgtgcacgccgcagaactgctcggtcgatccggaaaccgcggtcagctac
gagctcggcaccaagtgggacttcctcgacggccgcctcgcgctgacgggctcggtgttc
cgcaacgaccgcaagaactacaaggtcgccgacccggccaacccgctcaacccgtccggc
ctgcagcagctcgacggccgcgcgcgcgtcgacggcgtgatgctcggcctgtccggcctg
ctgaccgaccactgggcggtttacgccaactacgccttcctcgacagcgaagtgctgcgc
ggcgtgtccaaccgtcaggcgcagctcggccaggacttcaccaagggcgaccgcctgctg
agcgtgccggagcactccttcagcctgtggaccacctacgacctgagcccgaagtggcag
atcggctacggcgcgacctaccaaggcaagatctggctgacccagcacagcgcgaccaac
gtcaacggcccgctgaccacctacggcagctactggacccaccgcgcgatggtcgcctac
aagatcagccgccaggcccagctgcagctcaacgtcaacaacctgagcgacgaagagtat
ttcacccgcatccgcaacaacggctgggccaccccgggcgacggccgccaggtggtgctg
agcgccaacttctcgttctga
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