Lysobacter yananisis: RDV84_00985
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Entry
RDV84_00985 CDS
T09342
Symbol
hemE
Name
(GenBank) uroporphyrinogen decarboxylase
KO
K01599
uroporphyrinogen decarboxylase [EC:
4.1.1.37
]
Organism
lya
Lysobacter yananisis
Pathway
lya00860
Porphyrin metabolism
lya01100
Metabolic pathways
lya01110
Biosynthesis of secondary metabolites
lya01240
Biosynthesis of cofactors
Module
lya_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RDV84_00985 (hemE)
Enzymes [BR:
lya01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.37 uroporphyrinogen decarboxylase
RDV84_00985 (hemE)
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Motif
Pfam:
URO-D
PutA_1st
Motif
Other DBs
NCBI-ProteinID:
WMT03459
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Position
197796..198872
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AA seq
358 aa
AA seq
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MSSQPLANDRFLRALRRQPVDRTPVWLMRQAGRYLPEYRATRAQAGSFLQLAKNPELACE
VTLQPLRRFPLDAAILFSDILTVPDAMGLGLYFADGEGPKFERPIRSAADIDKLGVPDME
TDLRYVMDAVRTIRRELNGSVPLIGFSGSPWTIACYMVEGGGSDNYSKVKSLALNDPAAM
HKLLGTVTDAVIAYLKAQHAAGAQALQVFDTWGGVLSPSMYREFSLRYLQRIAAELPRGD
GETRAPLILFGKGNDPYLDELAASGAEAVGVDWTIGLGDAARRIGGRTALQGNLDPVTLY
ASPEAIRREVGRALDDYRDGNGGSREGHVFNLGHGLSPDMSPEHVGALVAAVHELSAR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccagcccctcgccaacgatcgcttcctgcgcgccctgcgccgccaacccgtc
gaccgcacgcccgtgtggctgatgcgccaggccggccgctacctgcccgagtaccgcgcc
acccgcgcccaggccggcagcttcctgcaactggccaagaacccggagttggcctgcgag
gtcaccctgcagccgctgcgccggttcccgctggacgcggcgatcctgttctccgacatc
ctcaccgtgcccgacgcgatgggcctgggcctgtacttcgccgacggcgagggcccgaag
ttcgagcgcccgatccgctccgccgccgacatcgacaagctcggcgtgcccgacatggag
accgacctgcgctacgtgatggacgcggtgcgcaccatccgccgcgaattgaacggctcg
gtgccgctgatcggtttctccggcagtccgtggaccatcgcctgctacatggtcgaaggc
ggcggcagcgacaactattccaaggtcaagtcgctcgcgctcaacgacccggcggcgatg
cacaagctgctgggcacggtcaccgacgcggtgatcgcgtacctcaaggcccagcacgcc
gccggcgcgcaggcgctgcaggtgttcgacacctggggcggggtgctgtcgccgtcgatg
taccgcgagttctcgctgcgctatctgcagcgcatcgccgccgaactgccgcgcggcgac
ggcgagacgcgcgcgccgctgatcctgttcggcaagggcaacgatccttacctggacgaa
ctcgccgccagcggcgccgaggcagtcggggtggattggaccatcggcctgggcgacgcc
gcgcgccgcatcggcgggcgcaccgcgctgcagggcaacctcgatccggtgacgctgtac
gcctcgcccgaagcgatccgccgcgaagtcgggcgcgcgctcgacgactatcgcgacggc
aacggcggctcgcgcgaagggcacgtgttcaacctcggccacgggctgtcgccggacatg
tcgccggagcatgtcggcgcgctggtggcggcggtgcacgagttgagcgcgcgctga
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