Lysobacter yananisis: RDV84_01920
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Entry
RDV84_01920 CDS
T09342
Name
(GenBank) penicillin-binding protein 1A
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
lya
Lysobacter yananisis
Pathway
lya00550
Peptidoglycan biosynthesis
lya01100
Metabolic pathways
lya01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RDV84_01920
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RDV84_01920
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lya01003
]
RDV84_01920
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lya01011
]
RDV84_01920
Enzymes [BR:
lya01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
RDV84_01920
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RDV84_01920
Glycosyltransferases [BR:
lya01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
RDV84_01920
Peptidoglycan biosynthesis and degradation proteins [BR:
lya01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
RDV84_01920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
WMT03632
LinkDB
All DBs
Position
436341..438896
Genome browser
AA seq
851 aa
AA seq
DB search
MSRLRRWLRWALYAFIGAALLGAIALGTLYYLIVPKLPDVETLRTIELQEPMYVYARDGR
LMAMFGETRRYPVAIEDVPDRLKNAFIAIEDSRFYTHHGIDYKGIARAVWLLATTDDKRV
PGGSTITQQVARQYFLSSEYSYKRKLGEMLLAMRMERELSKDEIFELYLNKSFFGNRAYG
VGAAAEFYYGKKMNELSLDEMASLAGIPKFPSSGNPLSNPDRAKIRRDYILDRMAEQNFV
TRAEADAAKAVAMHASPHERPVEVYAPYVAEMVRQEMVARYGAEALTKGYHVTTTIDPEL
QTAADKAIRDGLSVYDRRHGWHGVEQHFELAPSEDATAAKVRLRGIPAQANLLPAVVLST
AGGQASVVLGDGTELALSEKQGFLGRSPGSLLKRGDLVRVARIETAAPAPAAKPGETAAP
PTAPPTISYRLDQLPQAQAALVSLEPGNGALRALSGGYSFAGAKFNRATQARRQPGSSFK
PFVYAASFERGYNPASIVLDAPVVFKDRRGHLWRPQNDGGNFAGPMRVREAMVQSRNLVS
VRLLDAIGVDFARKYISHFGFDIEQLPPNLSMSLGTASLTPLSVARGYATFANGGFRIDP
WFIDEVKDRAGAVVFKEKPATACPQCVGRGGTASAALPANNVVDGFDLGPAPGAVADARK
PDPKKDKKDKAKPEEPAKKLTPEEIAQIKVAPRAIDDRIAYQIVSMLRDVVKRGTGTAAK
VLGRDDVGGKTGSTNDHRDAWFSGFGGPYVTTVWVGRDNYKSLGYREYGGKAALPIWIDY
MRVALKDQPIRDNEPPEGMVKVSVGASGALIPDGAGGIVEWVKAEDLERMQTYTDYGSED
QAPSEESFDIF
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacttcgccgttggctgcgctgggcgctgtacgcgttcatcggcgcggccctg
ctgggcgcgatcgcgctcggcacgctgtactacctgatcgtgcccaagctgccggacgtt
gagaccctgcgcacgatcgagctgcaggagccgatgtacgtctacgcccgcgacggccgc
ctgatggcgatgttcggcgagacccggcgctacccggtggcgatcgaggacgtgcccgac
cggctcaagaacgcgttcatcgcgatcgaggactcgcgcttctacacccaccacggcatc
gactacaaaggcatcgcgcgcgcggtgtggctgctggctaccaccgacgacaagcgcgtg
cccggcggctcgaccatcacccagcaggtcgcgcgccagtacttcctgagctcggaatac
agctacaagcgcaagctcggcgaaatgctgctggcgatgcgcatggagcgcgagctgagc
aaggacgagatcttcgagctgtacttgaacaagagtttcttcggcaaccgcgcctacggc
gtcggcgccgccgccgagttctactacggcaagaagatgaacgagctgagcctggacgag
atggcctcgctcgccggcatcccgaagttcccgtccagcggcaatccgctgagcaatccc
gaccgcgccaagatccgccgcgattacatcctcgaccgcatggccgagcagaacttcgtc
acccgcgccgaagccgacgcggccaaggcggtggcgatgcacgccagcccgcacgaacgt
ccggtcgaggtgtacgcgccgtacgtggccgaaatggtgcgccaggaaatggtcgcccgt
tacggcgccgaagcgctgaccaagggctaccacgtcaccaccaccatcgacccggagctg
cagaccgcggccgacaaggcgatccgcgacggcctgtcggtgtacgaccgccgccacggc
tggcacggcgtggagcagcacttcgaactggccccgagcgaggacgccaccgccgccaag
gtgcgcctgcgcggcattccggcccaggccaacctgttgccggcggtggtgctgtcgacg
gccggcggccaggccagcgtggtgctcggcgacggcaccgaactcgcgctgagcgagaaa
caaggcttcctcggccgcagcccgggcagcctgctcaagcgcggcgacctggtgcgggtg
gcgcggatcgagaccgccgcgccggcgcccgcggccaagcccggcgaaaccgccgcgccg
ccgactgcgccgccgaccatcagctaccgcctcgaccagttgccgcaggcgcaggccgct
ctggtctcgctggaaccgggcaacggcgcgttgcgcgcgctgtccggcggctacagcttc
gccggcgccaagttcaaccgcgccacccaggcgcggcgccagccgggttcgagcttcaag
ccgttcgtgtacgcggcctcgttcgagcgcggctacaacccggcgtcgatcgtgctcgac
gccccggtggtgttcaaggaccgccgcggccacctgtggcgcccgcagaacgacggcggc
aacttcgccggcccgatgcgcgtgcgcgaggcgatggtgcagtcgcgcaacctggtctcg
gtgcgcctgctcgacgccatcggcgtcgacttcgcgcgcaagtacatcagccacttcggc
ttcgacatcgagcaactgccgccgaacctgtcgatgtcgctgggcaccgcctcgctgacc
ccgctgtcggtcgcgcgcggctacgccaccttcgccaacggcggtttccgcatcgatccg
tggttcatcgacgaggtcaaggaccgcgccggcgcggtggtgttcaaggaaaagcccgcc
accgcctgcccgcagtgcgtcggccgcggcggcaccgccagcgcggcgctgccggccaac
aacgtcgtcgacggcttcgacctgggcccggcgccgggcgcggtcgccgacgccaggaag
cccgatccgaagaaggacaagaaggacaaggccaagcccgaggagccggcgaagaagctc
acgccggaagagatcgcgcagatcaaggtcgcgccgcgcgcgatcgacgaccgcatcgcc
taccagatcgtctcgatgctgcgcgacgtggtcaagcgcggcaccggcaccgcggccaag
gtgctcggccgcgacgacgtcggcggcaagaccggctcgaccaacgaccaccgcgacgcc
tggttctccggcttcggcggcccctacgtcaccaccgtctgggtcggccgcgacaactac
aagtcgctgggctatcgcgagtacggcggcaaggccgcgctgccgatctggatcgactac
atgcgcgtggcgctcaaggaccagccgatccgcgacaacgaaccgccggagggcatggtc
aaggtctccgtcggcgccagcggcgcgctgattcccgacggcgccggcggcatcgtcgag
tgggtcaaggccgaggacctggagcggatgcagacctacaccgactacggcagcgaagac
caggcgccgtcggaagagtcgttcgacatcttctga
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