Lysobacter yananisis: RDV84_02085
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Entry
RDV84_02085 CDS
T09342
Name
(GenBank) EAL domain-containing protein
Organism
lya
Lysobacter yananisis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
Reg_prop
PAS_3
Y_Y_Y
PAS_9
PAS_4
PAS
SGL
PAS_8
Beta-prop_LRRK2
PAS_7
Vgb_lyase
8xMP
Motif
Other DBs
NCBI-ProteinID:
WMT03665
LinkDB
All DBs
Position
476572..481143
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AA seq
1523 aa
AA seq
DB search
MTAVLIALLSCAAAWPQRVAAATRDFYFSRLGSELGLSQNSVTAFAQDAHGFVWVGTQGG
LHRYDGQRYLAYRHDPRDPASLPDSYVTALALDGQRALWVGTHSEYLARLDLASGSIHRY
GAPESQAGRQVVSLLPWREQVLIGTLAGLERLDPQTGTRELLLALPGEATRPAPWQGLAE
GRDGSAWFASAAGLHRIRVDGRVERIGAAIALRSVLIDHRGVLWAGGGDGLYRLDGRTGV
LVKIEDEALAGLRDARALAEAPDHRLWIAGFGTGLYRYDPQTGHSQRVHAEPGVEASLPE
NTVDALMIDHGGLLWAGGIFRGVAVADPRGTRFSYVLDLEDARPDRAAADASIRALAQDD
SGAIWIGTDNAHLRRYDLSGDRFQDMTSLLPANARQVAAIARQPETGPADADAATATASD
APKPVPPGRLWLATSGGLLRLDPGTGRIEPVDLRGYKDAALRSLRFARDGSLWLGSDDIG
ALHYLPDSGVLVRYAYREGDPKGLSHPRVNAILEDRHGRIWFGTGDGLDLLDPKTGYLRH
YRHVTDQADSLPGNVVRALHQSADGSIWVGTPAGLSRVVEFGDGRIRFEHPLAEVLGDHP
VPVVFTIAERPDGRLWLGTDTGILRFDPGASLVRRYGLADGLQDLEFNAGAVAALADGRL
AFGGVRGLNLFDPARIADSRYTPPVRLLGAWIGSDTSAGSSALWQSSKLEIPDGAGILRL
RIGALDFGPNSGIRYRYRMDGFDRDWIDNGPRQDITYTRLPPGRYLFRAQSTNRDGVWNT
QELTIPVGVDPPLWRHPLAIAALALAALGLLLSFGWRWHRARQRERGYFTQIREREERLK
LALWASGEQFWDYDLKRRELHRMRVDDHNAQSPEIGVQADIADDHEIHPDDLPRVAELLR
KHLKGDAALFLSEHRMRTPKGDWGWVRARGRVVERDGEGHPVRVAGTGRDVTAVRSAERE
RRIASEVLRSMAEAVAVFDRDFVFVSINPAFSRMTGYPEGEVIGQTTGLLDSRQHDPEFY
SDMRDELQRSGRWSGEIWQQRKDGNEFLCWLQASIVLDSSGQRGHYVAVLTDITDQKRAE
QELRYLANYDTLTSLPNRTLLSERLSRAIVRARRHGHRIALLFLDLDRFKDINDSLGHAA
GDRILRAAAVRLQETVGAEHTVARLGGDEFTVVLENLDTPEQAEDVARRIIKAFEAPLDF
DERHDVAISPSIGISVYPDHAQVPTDLLKHADTAMYQAKAAGRRTFMRYTEAMDIEIRQR
ATISAALRKVLDRNELRLVFQPRLSLPEARITGVEALLRWHSAEYGNIPPTQFIPLAEES
GLILEIGEWAMREACSRLRQWRQHGLDQLSVSVNVSAIQLLRGDLPKMVARALSESGIPP
WRLELELTESVVMSNAAHTSNTMQALRELGVALAVDDFGTGYSSLAYLKRLPINTLKIDK
EFISDLTRDPDDEAITTTVITMAHSLGLNVVAEGVELEEQMEFLRAHGCDEIQGYWLAKP
LEADACLAFIKQWQPPQNVRAAF
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgccgtcctgatcgccctgctgtcgtgcgcggcggcgtggccgcagcgcgtggcg
gcggcgacccgcgatttctacttctcgcgcctgggcagcgagctgggcctgagccagaac
tcggtcaccgcgttcgcccaggacgcgcacggtttcgtctgggtcggcacccagggcggt
ttgcaccgctacgacggccagcgctacctcgcctaccgccacgatccgcgcgacccggcc
agcctgcccgacagctacgtcaccgcgctggcgctcgacggccagcgcgcgctgtgggtc
ggcacgcactcggaatacctggcgcggctggacctggccagcggcagcatccaccgctac
ggcgcgcccgagtcgcaggccggacgccaggtggtgtcgctgctgccgtggcgcgagcag
gtgctgatcggcacccttgccgggttggaacggttggacccgcagaccggcacccgcgag
ttgttgttggcgctgcccggcgaagccacccgcccggcgccgtggcagggcctggccgag
ggccgcgacggcagcgcctggttcgccagcgccgccggcctgcaccgcatccgcgtcgac
ggccgggtcgagcgcatcggcgcggcgatcgcgctgcgcagcgtgctgatcgatcaccgc
ggcgtgctctgggccggcggcggcgacggcctgtaccggctcgacggccgcaccggcgtg
ctggtcaagatcgaggacgaagccctggccggcctgcgcgacgcgcgcgccctggccgag
gcgcccgaccaccgcctgtggatcgccggtttcggcaccggcctgtaccgttacgacccg
cagaccggccacagccagcgcgtccacgccgagcccggagtcgaggccagcctgccggaa
aacaccgtcgatgcgctgatgatcgaccacggcggcctgctgtgggccggcggcatcttc
cgcggcgtggccgtggccgatccgcgcggcacccgtttcagctatgtgctcgacctggaa
gacgcgcgcccggaccgcgccgccgccgacgccagcatccgcgccctggcccaggacgac
agcggcgcgatctggatcggcaccgacaacgcccacctgcgccgctacgacctgtccggc
gaccgcttccaggacatgacctcgctgctgccggcgaacgcccgccaggtggcggcgatc
gcgcgccagcccgaaaccgggcccgccgatgccgacgcggccacggcgaccgccagtgac
gcgcccaaaccggtgccgccgggccggctgtggctggccacttccggtggcctgctgcgg
ctggacccgggcaccggccggatcgagccggtcgacctgcgcggctacaaggacgccgcc
ctgcgcagcctgcgcttcgcccgcgacggcagcctgtggctgggcagcgacgacatcggc
gcgctgcattacctgcccgacagcggcgtgctggtgcgctacgcctaccgcgagggcgac
cccaagggcctgagccatccgcgcgtcaacgcgatcctggaggaccgccacggacgcatc
tggttcggcaccggcgacggcctggacctgctcgatcccaagaccggctacctgcgccat
taccgccacgtcaccgaccaggccgacagcctgccaggcaacgtggtgcgcgcgctgcac
cagtccgccgacggctcgatctgggtcggcaccccggccgggctgagccgggtggtggaa
ttcggcgacggccgcatccgcttcgagcacccgctggccgaagtgctcggcgaccatccg
gtgccggtggtgttcaccatcgccgagcgtcccgacggccgcctgtggctgggcaccgac
accggcatcctgcgcttcgacccgggcgcctcgctggtgcgccgctacggcctggccgac
ggcctgcaggacctggaattcaacgccggcgcggtcgccgcgctggccgacgggcgcctg
gcctttggcggcgtgcgcgggctcaacctgttcgatccggcgcgcatcgccgactcgcgc
tacaccccgccggtgcgcctgctcggcgcctggatcggctcggacaccagcgccggctcc
agcgcgctgtggcagtcgtccaagctcgaaatccccgacggcgccggcatcctgcgcctg
cgcatcggcgcgctcgacttcggccccaacagcggcatccgctatcgctaccgcatggac
gggttcgaccgcgactggatcgacaacggcccgcgccaggacatcacctacacccgcctg
ccgccggggcgctacctgttccgcgcccagtcgaccaaccgcgacggggtctggaacacc
caggagctgaccattccggtcggcgtggatccgccgctgtggcggcacccgctggcgatc
gccgccctggcgctggccgcgctcggcctgctgctgagcttcggctggcgctggcaccgc
gcgcgccagcgcgaacgcggctacttcacccagatccgcgaacgcgaagaacgcctgaaa
ctggcgctgtgggcgtccggcgaacagttctgggactacgacctcaagcgccgcgagctg
caccgcatgcgcgtggacgaccacaacgcgcaatcgcccgagatcggcgtgcaggccgac
atcgccgacgatcacgagatccaccccgacgacctgccgcgggtcgccgagctgctgcgc
aagcacctcaagggcgacgccgcgctgttcctgtccgagcaccgcatgcgcacgcccaag
ggcgactggggctgggtgcgggcgcgcggccgggtggtcgagcgcgacggcgaaggccat
ccggtgcgcgtggccggcaccggccgcgacgtcaccgcggtgcgcagcgccgagcgcgaa
cgccgcatcgccagcgaagtgctgcgctcgatggccgaggcggtcgcggtgttcgaccgc
gacttcgtgttcgtctcgatcaaccccgcgttctcgcgcatgaccggctatcccgagggc
gaggtcatcggccagaccaccggcctgctcgacagccgccagcacgatccggagttctac
tcggacatgcgcgacgagctgcagcgcagcggccgctggtccggcgagatctggcagcaa
cgcaaggacggcaacgaattcctgtgctggctgcaggcgtccatcgtgctcgacagcagc
ggccagcgcggccactacgtcgcggtgctgaccgacatcaccgaccagaaacgcgccgag
caggaactgcgctatctcgccaactacgacaccctgaccagcctgcccaaccgcacgctg
ctgtcggagcggctgtcgcgggcgatcgtgcgtgcgcgccgccacggccaccgcatcgcc
ctgctgttcctcgacctggaccggttcaaggacatcaacgattcgctcggccacgccgcc
ggcgaccgcatcctgcgcgcggccgcggtgcggctgcaggaaaccgtcggcgccgaacac
accgtggcgcgcctgggcggcgacgaattcaccgtggtgctggaaaacctggacacgccc
gagcaggccgaggacgtggcccggcgcatcatcaaggcgttcgaagcgccgctggacttc
gacgaacgccacgacgtggcgatctcgccgtcgatcggcatcagcgtctatcccgaccac
gcccaggtgccgaccgacctgctcaagcacgccgacaccgcgatgtaccaggccaaggcc
gccggccggcgcaccttcatgcgttacaccgaggcgatggacatcgagatccgccagcgc
gcgacgatttccgcggcgctgcgcaaggtgctcgaccgcaacgaactgcggctggtgttc
cagccgcggctgtcgctgccggaagcgcgcatcaccggcgtggaagcgctgctgcgctgg
cacagcgccgaatacggcaacatcccgccgacccagttcatcccgctggccgaggaaagc
gggctgatcctggagatcggcgagtgggcgatgcgcgaggcctgcagccgcctgcgccag
tggcgccagcacgggctcgaccagctgtcggtgtcggtcaacgtctcggcgatccaactg
ctgcgcggcgacctgccgaagatggtcgcccgcgcgctcagcgagagcggcatcccgccg
tggcggctggagctggaactgaccgaaagcgtggtcatgtccaacgccgcgcacacctcc
aacaccatgcaggcgctgcgcgaactcggcgtggcgctggcggtggacgacttcggcacc
ggctattcgtcgctcgcgtatctcaagcgcctgccgatcaacacattgaagatcgacaaa
gagttcatcagcgacctgacccgcgatcccgacgacgaagccatcaccaccaccgtcatc
accatggcccactcgctgggcctgaacgtggtcgccgagggcgtcgaactcgaagagcag
atggaattcctgcgcgcgcacggctgcgacgagatccagggctactggctggccaagccg
ctggaagccgacgcctgcctggccttcatcaagcaatggcagccgccgcagaacgtgcgc
gccgcattctga
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