Lysobacter yananisis: RDV84_02370
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Entry
RDV84_02370 CDS
T09342
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
lya
Lysobacter yananisis
Pathway
lya00730
Thiamine metabolism
lya01100
Metabolic pathways
lya01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
RDV84_02370 (thiC)
Enzymes [BR:
lya01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
RDV84_02370 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
WMT03712
LinkDB
All DBs
Position
complement(548647..550524)
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AA seq
625 aa
AA seq
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MNAVPSELIQQAEKLSADVTRPIPGSRKIHVQGSRPDLNVPMREIALDRTPTIFGGEDNA
PLAVYDTSGAYTDPDANIDLAAGLAPLRANWIAERGDTELLKGLSSEFGRQREHDPKLAH
VRFGNRPLPRRAIAGANVTQMHYARRGIVTPEMEYIAIRENQRLESIREAHLLRQHPGQS
FGADIQKIITPEFVREEVARGRAIIPNNINHPESEPMIIGRNFLTKVNANIGNSAVSSGI
AEEVEKLVWSMRWGADTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVDGRAEE
LNWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTARRVTGIVSRGGSILAKWCLAHHKE
NFLYTHFEDICEIMKAYDVAFSLGDGLRPGSIADANDAAQFGELETLGELTQIAWKHDVQ
TMIEGPGHVPMQLIKENMDKQLQVCGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWYG
TAMLCYVTPKEHLGLPNKHDVREGLMAYKIAAHAADLAKGHPGAQARDNAMSKARFEFRW
EDQFNLGLDPERAREYHDETLPKQAHKVAHFCSMCGPHFCSMKITQDVRDYAKEHGLDES
AAVNEGMAEKSAEFRAQGAEVYHRA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcggttccctccgagctgatccagcaagccgagaagttgtcggccgacgtcacc
cgcccgatccccggctcgcgcaagatccatgtgcaaggctcgcgcccggacctgaacgtg
ccgatgcgcgagatcgcgctggatcgcacgccgaccatcttcggcggcgaggacaacgcg
ccgctggcggtgtacgacacctccggcgcctacaccgacccggacgcgaacatcgacctg
gccgcgggcctggcgccgctgcgcgcgaactggatcgccgagcgcggcgacaccgaactg
ctcaagggcctgtcctcggaattcggccgccagcgcgagcacgaccccaagctcgcccac
gtgcgcttcggcaaccgtccgctgccgcgccgcgcgatcgccggcgccaacgtcacccag
atgcactacgcacgccgcggcatcgtcacgccggagatggaatacatcgccatccgcgag
aaccagcggctggagtcgatccgcgaggcgcacctgctgcgccagcacccgggccagagt
ttcggcgccgacatccagaagatcatcacccccgagttcgtgcgcgaggaagtcgcgcgc
ggccgcgcgatcatccccaacaacatcaaccatcccgaaagcgagccgatgatcatcggc
cgcaacttcctgaccaaggtcaacgcgaacatcggcaattcggcggtgtcgtcgggcatc
gccgaggaagtggagaagctggtgtggtcgatgcgctggggcgccgacacggtcatggac
ctgtccaccggcaagcacatccacgaaacccgcgagtggatcatccgcaattcgccggtg
ccgatcggcacggtgccgatctatcaggcgctggaaaaggtcgacggccgcgccgaggag
ctcaactgggaaatcttccgcgacaccctgatcgagcaggccgagcagggcgtggactac
ttcaccatccacgccggcgtcttgctgcgctacgtgccgctgaccgcacgccgagtcacc
ggcatcgtctcgcgcggcggctcgatcctggccaagtggtgcctggcgcaccacaaggaa
aacttcctctacacccatttcgaagacatctgcgaaatcatgaaggcctacgacgtggcc
ttctcgctcggcgacggcctgcgtccgggctcgatcgccgacgccaacgacgcggcccag
ttcggcgagctggaaacgctcggcgagctgacccagatcgcctggaagcacgacgtgcag
accatgatcgagggccccggccacgtgccgatgcagctcatcaaggaaaacatggacaag
cagctgcaggtgtgcggcgaagcgccgttctacaccctcggcccgctgaccaccgacatc
gcgccgggctacgaccacatcacctcggcgatcggcgcggcgatgatcggttggtacggc
accgcgatgctgtgctacgtgacgccgaaggagcacctgggcctgcccaacaagcacgac
gtgcgcgaagggttgatggcgtacaagatcgccgcgcacgcggccgacctggccaagggc
cacccgggcgcgcaggcgcgcgacaacgcgatgagcaaggcgcgtttcgagttccgctgg
gaggaccagttcaacctcggcctcgacccggagcgcgcgcgcgagtaccacgacgagacc
ctgcccaagcaggcgcacaaggtcgcccacttctgctcgatgtgcggcccgcacttctgc
tcgatgaagatcacccaggacgtgcgcgactacgccaaggagcacggcctggacgagagc
gcggcggtgaacgagggcatggccgagaagtcggcggagttccgcgcgcagggcgcggag
gtctaccaccgcgcctga
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