Lysobacter yananisis: RDV84_02595
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Entry
RDV84_02595 CDS
T09342
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lya
Lysobacter yananisis
Pathway
lya03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RDV84_02595 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lya03019
]
RDV84_02595 (groL)
03110 Chaperones and folding catalysts [BR:
lya03110
]
RDV84_02595 (groL)
03029 Mitochondrial biogenesis [BR:
lya03029
]
RDV84_02595 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lya04147
]
RDV84_02595 (groL)
Enzymes [BR:
lya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RDV84_02595 (groL)
Messenger RNA biogenesis [BR:
lya03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RDV84_02595 (groL)
Chaperones and folding catalysts [BR:
lya03110
]
Heat shock proteins
HSP60 / Chaperonin
RDV84_02595 (groL)
Mitochondrial biogenesis [BR:
lya03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RDV84_02595 (groL)
Exosome [BR:
lya04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RDV84_02595 (groL)
Exosomal proteins of other body fluids (saliva and urine)
RDV84_02595 (groL)
Exosomal proteins of breast cancer cells
RDV84_02595 (groL)
Exosomal proteins of colorectal cancer cells
RDV84_02595 (groL)
Exosomal proteins of bladder cancer cells
RDV84_02595 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WMT03754
LinkDB
All DBs
Position
complement(604820..606460)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKEIRFGEDARAKMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEI
ELADKFENMGAQMVKEVASKTSDNAGDGTTTATVLAQALIREGMKAVAAGMNPMDLKRGI
DKAVTEAVVELKKLSKPSSTSKEIAQVGAISANSDTNIGDLIAQAMDKVGKEGVITVEDG
SGLENELDVVEGMQFDRGYLSPYFINNQQSMQAELDDPFILLHDKKISNVRDLLPVLEGV
AKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVCAVKAPGFGDRRKAMLEDMAVLTGGTV
ISEEVGLQLEKATIKDLGRAKKIQVSKENTTIIDGAGESSGIEARIKQIKAQIEETSSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALI
RAKAAIGGLKGINEDQNHGIAIALRAMEAPLREIVTNAGEEPSVILNKVIEGKGAYGYNA
ATGEYVDMIEAGILDPTKVTRTALQNAASIAGLMITTEAMVAELPKKEEPAMPGGGGMGG
MGGMDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaagaaattcgtttcggtgaagacgcccgcgccaagatggtgcgcggcgtc
aacgtgctcgccaacgccgtcaaggccaccctcggtccgaagggccgcaacgtcgtgctc
gagaagagcttcggcgcgccgacgatcaccaaggacggcgtgtccgtcgccaaggagatc
gagctggccgacaagttcgagaacatgggcgcgcagatggtcaaggaagtcgcttccaag
acctccgacaacgccggcgacggcaccaccaccgcgaccgtgctggcccaggcgctgatt
cgcgaaggcatgaaggcggtcgccgccggcatgaacccgatggacctcaagcgcggcatc
gacaaggccgtgaccgaggccgtggtcgagctgaagaagctgtccaagccgtcctcgacc
tcgaaggaaatcgcccaggtcggcgcgatctcggccaactccgacaccaacatcggcgac
ctcatcgcgcaggcgatggacaaggtcggcaaggaaggcgtcatcaccgtcgaagacggc
tcgggcctggagaacgagctcgacgtggtcgagggcatgcagttcgaccgcggctacctg
tcgccgtacttcatcaacaaccagcagtcgatgcaggccgagctggacgatccgttcatc
ctgctgcacgacaagaagatctccaacgtgcgcgacctgctgccggtgctggaaggcgtc
gccaaggccggcaagccgctgctgatcgtcgccgaggaagtcgaaggcgaagcgctggcg
accctggtcgtcaacaccatccgcggcatcgtcaaggtctgcgcggtcaaggctccgggc
ttcggcgaccgccgcaaggcgatgctggaagacatggccgtcctgaccggcggcaccgtg
atctccgaggaagtcggcctgcagctcgagaaggcgaccatcaaggatctgggccgcgcc
aagaagatccaggtctcgaaggaaaacaccaccatcatcgacggcgcgggcgagagctcg
ggcatcgaggcgcgcatcaagcagatcaaggcgcagatcgaagagacctcttcggactac
gaccgcgagaagctgcaggagcgcgtggccaagctcgccggcggcgtcgcggtgatcaag
gtcggcgccgccaccgaagtcgagatgaaggaaaagaaggcccgcgtcgaagacgcgctg
cacgccacccgcgctgccgtggaagaaggcatcgtcccgggcggcggcgtcgcgctgatc
cgcgccaaggccgcgatcggcggtctgaagggcatcaacgaagaccagaaccacggcatc
gccatcgccctgcgcgcgatggaagcgccgctgcgcgagatcgtgaccaacgccggcgaa
gagccgtcggtcatcctcaacaaggtcatcgaaggcaagggcgcctacggctacaacgcc
gccaccggcgagtacgtcgacatgatcgaggccggcatcctggatccgaccaaggtcacc
cgcaccgcgctgcagaacgccgcgtcgatcgccggtctgatgatcacgaccgaagcgatg
gtcgccgagctgccgaagaaggaagagccggcgatgccgggcggcggcggcatgggcggc
atgggcggcatggacttctga
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