Lysobacter yananisis: RDV84_02890
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Entry
RDV84_02890 CDS
T09342
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
lya
Lysobacter yananisis
Pathway
lya03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RDV84_02890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lya03019
]
RDV84_02890
Messenger RNA biogenesis [BR:
lya03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RDV84_02890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
WMT03807
UniProt:
A0ABY9PD90
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All DBs
Position
complement(669630..670256)
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AA seq
208 aa
AA seq
DB search
MIDPDGYRPNVGIVLMHPDGRLFWARRVHRDGWQFPQGGMNSDETPLEAMYRELREETGL
QPHHVEVLGATPGWLRYRLPRRAVRRNDRLVCIGQKQVWFLLRLTGQESDLCLDVTDKPE
FDHWRWVDFWYPIEHVVMFKRGVYTSALRHLAPFARHVAGDQAVPMPCPVADARPDPRRD
AGLGGRQHQRPRARPGGQSACGGSEPGA
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatccggacggctacagacccaatgtaggcatcgtcctgatgcatcccgatggc
cgcctgttctgggcgcgcagggtgcatcgcgacggctggcagttcccgcagggcgggatg
aacagcgacgagacgccgctggaggccatgtatcgcgaattgcgcgaggaaaccggcctg
caaccccatcatgtcgaagtgctcggcgccaccccgggctggctacgctatcggctgccg
cgcagggcggtgcggcgcaacgaccggctggtctgcatcggccagaagcaggtgtggttc
ttgctgcggctgaccgggcaggaatcggatctgtgcctggacgtgaccgacaagcccgag
ttcgaccactggcgctgggtcgatttctggtacccgatcgagcacgtggtgatgttcaag
cgcggcgtctacaccagcgccctgcgccatttggcgccgttcgcgcgccatgtcgccggc
gaccaggcggtgccgatgccgtgcccggtcgccgatgcgcggcccgacccgcgccgcgat
gccggcctcggcggccgccagcaccagcggccgcgcgcgcggcccggcgggcagtcggcc
tgcggcggctccgaacccggcgcctga
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