Lysobacter yananisis: RDV84_03180
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Entry
RDV84_03180 CDS
T09342
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
lya
Lysobacter yananisis
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lya03009
]
RDV84_03180
Enzymes [BR:
lya01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
RDV84_03180
Ribosome biogenesis [BR:
lya03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RDV84_03180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WMT03862
LinkDB
All DBs
Position
complement(736241..736942)
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AA seq
233 aa
AA seq
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MKLVKLIANLGYGSRKDVAAMFRQGRIADADGEVLYADDQVEHAAIRIDGEPLDPPAGLA
LMLHKPVGYTCSTKDPGRVVYDLLPPRFRLRSPLLSPVGRLDRDTSGLLLLTDDGALLHR
IVSPKAKLGKVYEATLASDLRGDEAATFASGELMLESEKTPLAPALLETLEPRRARLTLT
EGRYHQVRRMFAAVGNHVEALHRARIGGLSLQDLPSGQWRALDSTDLETLFRG
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggtcaagctgatcgccaatctcggctacggcagccgcaaggacgtggccgcg
atgttccgccagggccgcatcgccgatgccgacggcgaggtgttgtacgccgacgaccag
gtcgaacacgccgcgatccgcatcgatggcgagccgctcgacccgccggccgggctggcg
ctgatgctgcacaagccggtcggctacacctgctcgaccaaggaccccggccgggtcgtc
tacgacctgctgccgccgcgcttccgcctgcgctcgccgttgctgtcgccggtcggccgg
ctcgaccgcgacaccagcggcctgctgctgctgaccgacgacggcgcgctgctgcaccgg
atcgtttcgccgaaggccaagctcggcaaggtctatgaagctaccctggcctcggacctg
cgcggcgacgaagcggcgacgttcgccagcggcgagctgatgctggaatcggaaaagacc
ccgctggcgccggcgctgttggaaacgctggaaccgcggcgggcgcggctgacgttgacc
gagggccgctatcaccaggtgcggcggatgttcgccgcggtcggcaaccatgtcgaagcg
ctgcaccgcgcgcgcatcggcggcttgtcgttgcaggatttgccgagcgggcaatggcgc
gcgctcgactccaccgatctcgagaccctgttccgtggctga
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