KEGG   Lysobacter yananisis: RDV84_04110
Entry
RDV84_04110       CDS       T09342                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
lya  Lysobacter yananisis
Brite
KEGG Orthology (KO) [BR:lya00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lya02044]
    RDV84_04110 (tssC)
Secretion system [BR:lya02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   RDV84_04110 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: WMT04044
UniProt: A0AA51SHT5
LinkDB
Position
complement(965587..967080)
AA seq 497 aa
MNATQAAGASAAAAGTEELGLLDQIVEKSKVAKSAAEHERAKDIISELAREVLEGTVVVS
DNLNLTLDARVAELDRLISDQLNAIMHAPQFQQLESSWRGLHYLCSQTSTGTQLKIKVFN
APKRELVKDFKSAIDFDQSSLFKKVYEEEFGTFGGSPFGALLGDYYIGRQAEDMYFVEQM
SHVAAAAHAPFISAASEEMFGLETFTDLGKPRDMAKVFDTVEYAKWKSFRDSEDSRYVGL
TLPRFLGRLPYNPKDGTVVEGFNFVEEVDGQDHSKYLWCNTAYAFGARLTKAFEDYAWCA
AIRGVEGGGLVEDLPTHTFRTDDGEVALKCPTEVAITDRREKELSDLGFIPLVHCKNTDY
AAFFGAQSSQKAKKYNTDSANANASLSAQLQYMFAVSRIAHYLKAMMREKIGSFASAGNV
EDFLNRWIAQYVLLDDNATQDAKAEHPLREAAIQVSEVPGRPGVYRAVAFLRPHFQLDEL
SVSLRLVAELPAGAKKG
NT seq 1494 nt   +upstreamnt  +downstreamnt
atgaacgctacgcaagccgccggcgccagcgccgccgccgccggtaccgaggaactcggc
ctgctcgaccagatcgtcgagaagagcaaggtcgccaagtccgccgccgagcacgagcgc
gccaaggacatcatttccgagctcgcgcgcgaggtgctggaaggcacggtcgtcgtctcc
gacaacctcaacctgaccctcgacgcgcgcgtggccgagctggaccggctgatctccgac
cagctcaacgcgatcatgcacgcgccgcagttccagcagctggaaagctcctggcgcggc
ctgcactacctgtgctcgcagacctccaccggcacccagctcaagatcaaggtgttcaac
gcgcccaagcgcgagctggtgaaggacttcaagtcggcgatcgacttcgaccagagctcg
ctgttcaagaaggtctacgaggaagagttcggcaccttcggcggctcgccgttcggcgcc
ctgctcggcgactactacatcggccgccaggccgaggacatgtacttcgtcgagcagatg
tcgcacgtcgccgccgccgcgcacgcgccgttcatctcggccgcgtcggaagaaatgttc
ggcctggagaccttcaccgacctgggcaagccgcgcgacatggccaaggtgttcgacacc
gtcgaatacgccaagtggaagtcgttccgcgactccgaggacagccgctacgtcggcctg
accctgccgcgcttcctcggccgcctgccgtacaaccccaaggacggcacggtggtggag
ggcttcaacttcgtcgaggaagtcgacggccaggaccacagcaagtacctgtggtgcaac
accgcctacgcgttcggcgcgcgcctgaccaaggccttcgaagactacgcctggtgcgcg
gcgatccgcggcgtggaaggcggcggcctggtcgaggacctgccgacccacaccttccgt
accgacgacggcgaggtcgcgctgaagtgcccgaccgaggtcgccatcaccgaccgccgc
gagaaggagctcagcgacctgggcttcatcccgctggtgcattgcaagaacaccgattac
gccgcgttcttcggcgcgcagtcgtcgcagaaggcgaagaagtacaacaccgactcggcg
aacgccaacgcgtcgctatcggcgcagttgcagtacatgttcgcggtgtcgcgcatcgcc
cattacctcaaggcgatgatgcgcgagaagatcggcagcttcgcttcggccggcaacgtc
gaggacttcctcaatcgctggatcgcgcagtacgtgctgctcgacgacaacgcgacccag
gacgccaaggccgagcacccgttgcgcgaagcggcgatccaggtatcggaggtgccgggc
cgtcccggcgtctaccgcgcggtggcgttcctgcggccgcacttccagctcgacgagctg
tcggtgtccttgcgtctggtcgcggaacttccggcgggggccaagaagggttag

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