KEGG   Lysobacter yananisis: RDV84_04140
Entry
RDV84_04140       CDS       T09342                                 
Name
(GenBank) type VI secretion system Vgr family protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
lya  Lysobacter yananisis
Pathway
lya03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lya00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RDV84_04140
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lya02044]
    RDV84_04140
Secretion system [BR:lya02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   RDV84_04140
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V Clp_N
Other DBs
NCBI-ProteinID: WMT04049
UniProt: A0ABY9PAZ1
LinkDB
Position
971621..974923
AA seq 1100 aa
MTDPYSPFALGGTAAAAAAPELARFAETSALADELISMARSGGDTTALSDELITMARSAL
PDITRDMPAVEVAASAIETEGLLGKLAAAAPVAAMVLQSLQRGASRETVAKQLAPRALQA
MGVPTSLADMADVALPAQGGLPGRAAGVAAQALSPQSFDPGDVASDLARYVPSDLPLSVP
AHDAPLARQAESLLRSTPQAARALASRFVGGQHLVEIETALPGAFLVERFHGQEAVCDSF
RFEIDCISTASALDTAALVGEPLTLRLQRADGSYRHWRGLCSQAAPLGGDGGYSRHRLTL
EPWLALLKLRRNALIFQDRDALEVLERVFADYPQAAWRFDVARSLPKPAITTQYRESDYD
FALRLLADAGLAWRFDHAQGEDEENAASAQGDGGHTLVIFDSQAEVPAASPGTLRFHRTA
STENEDAIGHFSELRQTTPDAVGTASWQAEQVEALSASALGDPAGPNLPRREVYSVPRSS
RYAERDHAQTTAELRLDALRLPQRLHAGSGSGRGVDAGRAFTLSQHADLSGQAFVPLRVE
HLAANNLTSNAVAILDASGLERGSYRNRFLAVPLGTAIVPLPRPKPIAPGAQTARVVGLA
DAANTVTRDHQVRIQFAWQRGAAPTYGGANETGSGAYPDGHAPGDETSGTWVRVAEWLAG
PNWGSHALPRIGAEVLVEFLHADIDQPLVTGQLFNGEVAPPFAAGQDSPANHIGTLSGLH
TQSLDGSGRQQWVVDDAPGQLRQRLHTTLADSRLELGYLIQHGDAQRGALRGQGFDLATL
GWGNLHAAQGVLLSTTARANARSTQFDIAEAVAQLKGAQNTAQALNDAAAQNQVPALRGN
PEQAAFLAAVDAQQDGKYDGDVAGQPASKPSGEGRDGGDPVERFAAAMLVAESPDSLAAT
TPASALAYAGGHSHLTAQDDAHFAAGQTFAAVSGAHSALYAQQGPLRAIAAAGPVSVRAH
VGTLELLADQSVTVTATDERIDVLAKQKIVLQAGQTRVTLEGGDITFECPGNFTVKAGMH
PFKGGGSDAAELAKLPDSRPKRFSEGFLLHDRQTGDPLVNRAYRIVLANGDIEEGVTNEK
GQTHLVMTAAEEILRIEIED
NT seq 3303 nt   +upstreamnt  +downstreamnt
atgactgatccctacagccccttcgccctgggcggcaccgccgccgcggccgcggcgcca
gaactggcgcggttcgccgagacctcggcgctggccgacgagctgatctcgatggcgcgc
tccggcggcgacaccaccgcgctgtcggacgagctgatcacgatggcgcgttccgcgctg
ccggacatcacccgcgacatgccggcggtcgaagtcgccgcgtcggcgatcgagaccgaa
ggcctgctcggcaagctcgccgccgccgcgccggtcgcggcgatggtgctgcaatcgctg
cagcgcggcgccagccgcgagaccgtcgccaaacagctcgcgccgcgcgccttgcaggcg
atgggcgtgccgacctcgctcgcggacatggccgatgtcgccctccccgcgcagggcggg
ctgccgggccgcgccgccggcgtcgcggcacaggcgctgtcgccgcagtccttcgacccc
ggcgacgtcgcatccgatctcgcgcgctacgtcccgtccgacctgccgctgtccgttccc
gcgcacgacgcgccgctcgcgcgccaggccgaatcgctgctgcgttccacgccgcaagcc
gcgcgcgcgctggcgtcgcgcttcgtcggcggccagcacctggtcgagatcgagaccgcc
ctgcccggcgcgttcctggtcgaacgcttccacggccaggaggcggtctgcgacagcttc
cgcttcgagatcgactgcatttccaccgcgtccgcgctcgacaccgcagccctggtcggc
gagccgctgacgctgcgcctgcagcgcgccgacggctcgtaccggcactggcgcggcctg
tgcagccaggccgcgccgctgggcggcgacggcggctattcgcgccaccggctgaccctg
gaaccgtggctggcgctgctgaagctgcgccgcaacgcgctgatcttccaggaccgcgac
gcgctggaagtgctcgaacgcgtgttcgccgactatccgcaggccgcgtggcgcttcgac
gtcgcccgcagcctgcccaagcccgcgatcaccacccagtaccgcgagagcgactacgac
ttcgcgctgcgcctgctcgccgacgccggcctggcctggcgcttcgatcacgcccagggc
gaagacgaggaaaacgcggcatcggcgcagggcgacggcggccacacattggtgatcttc
gacagccaggccgaagtgcccgcggcctcgcccggcacgctgcgcttccaccgcaccgcc
agcaccgaaaacgaagacgcgatcggccacttcagcgaactgcgccagaccacgcccgac
gcggtcggcaccgccagctggcaggccgagcaggtcgaggcgctgtcggccagcgccctg
ggcgatccggccgggccgaacctgccgcggcgcgaggtctacagcgtgccgcgcagcagc
cgctacgccgagcgcgaccacgcccagaccaccgccgagctgcgcctggacgcgctgcgc
ctgccgcagcgcctgcacgccggcagcggcagcggccgcggcgtcgatgccgggcgcgcg
ttcaccctgagccagcacgccgacctgtcggggcaggcgttcgtgccgctgcgggtcgag
cacctcgccgccaacaacctgacctcgaacgcggtcgcgatcctcgacgcgtcggggctg
gagcgcggcagctaccgcaaccgcttcctcgccgtgccgctgggcactgcgatcgtgccg
ctgccgcgccccaagccgatcgcgccgggcgcccagaccgcgcgcgtggtcggcctggcc
gatgccgccaacaccgtcacccgcgaccaccaggtgcgcatccagttcgcctggcagcgc
ggcgccgcgccgacctacggcggcgccaacgaaaccggctccggcgcctatcccgacggc
cacgccccgggcgacgaaacctccggcacctgggtccgcgtcgccgagtggctggccggc
ccgaactggggcagccacgcgctgccgcgcatcggtgccgaagtcctggtcgagttcctg
cacgccgacatcgaccagccgctggtcaccggccaattgttcaacggcgaagtcgcgccg
ccgttcgcggccggccaggactcgccggccaaccacatcggcaccctcagcggcctgcac
acccagtcgctggacggcagcggccgccagcagtgggtggtcgacgacgccccggggcaa
ctgcgccagcgcctgcacaccaccctggccgacagccgcctggaactgggctacctgatc
cagcacggcgacgcccagcgcggcgcgctgcgcgggcaaggcttcgacctggccacgctg
ggctggggcaacctgcacgccgcgcaaggcgtgctgctgtcgaccaccgcgcgcgccaac
gcacgctccacccagttcgacatcgccgaggcggtggcccagctcaagggcgcgcagaac
accgcgcaggcgctcaacgacgccgccgcccagaaccaggtgcccgcgctgcgcggcaat
cccgaacaagccgccttcctcgccgccgtcgacgcgcagcaggacggcaagtacgacggc
gatgtcgccggccagccggccagcaagcccagcggcgagggccgcgacggcggcgacccg
gtcgagcgcttcgccgcggcgatgcttgtcgccgagtcgcccgacagcctggccgcgacc
accccggccagcgcgctggcctacgccggcggccacagccacttgaccgcacaggacgac
gcccacttcgccgccggccagaccttcgccgcggtcagcggcgcccacagcgccctgtac
gcgcaacaaggcccgctgcgcgcgatcgccgccgcaggcccggtcagcgtgcgcgcccac
gtcggcacgctggaactgctcgccgaccagtccgtcaccgtcaccgccaccgacgaacgc
atcgacgtactggccaagcagaagatcgtgctgcaggcgggacagacgcgggtcacgctc
gagggcggcgacatcactttcgagtgcccggggaacttcacggtcaaggcggggatgcat
ccgttcaagggcggcggcagcgatgcggcggagttggccaagctgccggattcgcggccc
aagcgcttcagcgaaggcttcttgctgcacgatcgccagaccggcgacccgctggtcaat
cgcgcataccggatcgttctggccaacggcgacatcgaggaaggcgtcaccaacgagaag
ggccagacccatctcgtcatgaccgccgccgaagagatactgagaatcgagatcgaggac
tga

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