Lysobacter yananisis: RDV84_04185
Help
Entry
RDV84_04185 CDS
T09342
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
lya
Lysobacter yananisis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
YwqJ-deaminase
RHS
Motif
Other DBs
NCBI-ProteinID:
WMT04058
UniProt:
A0ABY9PAF3
LinkDB
All DBs
Position
complement(985536..990326)
Genome browser
AA seq
1596 aa
AA seq
DB search
MTIAAKHFDPQLGIDIHTYLIPPSPIPIPLPTPHIGIVLDPFDYLPIIGGTVHVNGIKRA
TAGTMGLDVHIPVGGVWMPPLKIAAGPQWDDELFMGSKTVLADGDPFSKITMPVLACNVV
GMVAPFRIRKPKKPHLSLLLPTTLNVAIPTNVYVGGPPTVSWTALLMTFGLPALGKLLKK
TGVAGAAGAAFKELRQKLFANMKPGVLKCNILRAEPVDIRDGSVSVIHEDFAVPGRLPLA
WRREYHSNDAHAGQCGRGWHTPADVRLEFDTDGSVLFLGPELPALFAHLPQGEGIEHAVR
EYVNGARLIREGAQWWVRTKDGLRYGFAAVAADAAGPQARSLPIQRIEDLCGNHWRFERS
DGQLTRIVESGVDGLQGRFIDVESRQGRIERMQLHDPATGLNHPLVGYRYQDGDLVAAVD
ALDAARRFEYRQHRMVRHTDRVGLSFHYAYDARWRVVRAWGDGGLHDYKFRYDELLGETE
ITDSLGHVSLVKFDENGLPLCEIDPLDGVTAFEYDEVGRTTAVVDPMGLRTEFEYDGRGN
LLTLTRADGGVLRTAYDADDRPVALTDPAGAEWTQIWDRRGLLIGQRTPTGAESHYEYSD
AGQIATYIDPLGAAMQAVFDRHGQLHRATDPLGSVDRFEHDAMGRLLTHVDPAGRTTRYS
HDGKGRLSRVVAEGGGRVQCEYDGEDRLIEHRDSNGAITRLEYSGIGQVARRIQPDGHAV
GYAYDSEERLVAVVNQRGERYELRRDALGRVVEEIDYWGQSRRYRFDAGGGLVGCVDALG
QSVAYRTDPLGRVVHKSAPDLERPGRRFEETFKYDKRGQFVELKNRHCHVLRKYDADGRL
TEETQNGFRVANDYDAAGNRILRETSAGNRVACEFDSRGQPRRIAINDEAPVEIERDATG
RATAERMGAHIRRDLSYDREGRLAAQSVMCGQQRLFETRYGYDPSDNLIERGDSEHGVDQ
YAYDPMGRLLAHTDPRGRIQHFLNDPAGDRLHARVRETRMLQAVGDQAQPSHWAREGDYE
GRRYVFDRAGDLVQRSDARTLPTASEDDSGLRLRWDAHHRLVESRKDGQVTRYGYDPLGR
RVFKRNPTQTTWFFWDGDALVGEVRQDNDAAGAPDPSADANVLDFFAARARKSAFQGLYP
KVREFVYYPGGFVPLALIDKRSAVSAPAAAENTGANSSARSSSQTSGPSPLRDARRPVAA
RASGTAAGAAVEPRLERSRAPGYGALTALSLGPDRGNAASAPQGSGANAVSPLARESAAE
GGAAAGAARPGYGNLAGSPSGANRDAAVEASSHGVEPERTASVVPSSPVAGALAAHADVA
DVGDLGAAQVDAASRVAIETLSAVVLYYHADPNGCSTRMTWQDGRVAWAATYSPSGKALR
IVADAVDNPIRLQGQYFDPETELHYNRYRYYDSDLAQYVGQDPIRLTGGEGLYSYGFNPV
GWIDPRGLTCTPAQVARMKELVQKAYDDMVAQGVGKAKRGPCFSIAMDMRTGRMSAVYNN
HVDGAVPGNLHPDIESRLPGVPPYVTENGLPLSKGAGSHSEVYAVNELLNNGTGAKLDDI
AVWSMESFGNKHAPVGAVKDPCPHCGHLLDGVTYVQ
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgccgcgaagcatttcgatccgcagctaggaatcgacatccacacctatctg
attccgccctcgccgattccgatcccgttgccgaccccgcacatcggcatcgtcctggac
ccgttcgattacctgccgatcatcggcggcaccgtccacgtcaacggcatcaagcgcgcc
accgcgggcaccatgggtctggacgtgcatattccggtcggcggcgtgtggatgccgccg
ctgaagatcgccgccggcccgcaatgggacgacgagctgttcatgggcagcaagaccgtg
ctcgccgacggcgatccgttctcgaagatcaccatgccggtgctcgcctgcaacgtggtc
ggaatggtcgcgccgttccggatccgcaagccgaagaagccgcacttgtcgttgctgttg
ccgaccacgctcaacgtggcgataccgaccaacgtctatgtcggcggcccgccgacggta
tcgtggaccgcgctgctgatgaccttcggccttccggccctgggcaagctgctgaagaag
accggcgttgccggcgccgccggggcggcgttcaaggagctgcggcagaaactgttcgcc
aacatgaagcccggcgtgctgaagtgcaacatcctgcgcgccgagccggtcgacattcgc
gacggcagcgtgtcggtgatccacgaagacttcgccgtccccgggcgcctgccgctagcg
tggcggcgcgagtaccattccaacgacgcccacgccggccagtgcggccgcggctggcat
acgccggccgatgtgcgcctggaattcgacaccgacggcagcgtgctgttccttggaccg
gaactgcccgccttgttcgcgcacctgccgcagggcgagggaatcgaacatgccgtgcgc
gagtacgtcaacggcgcgcgcctgatccgcgaaggcgcgcaatggtgggtgcggaccaag
gacggcctgcgctacggcttcgcggccgttgcggcggacgcagccggaccgcaggcgcgt
tcgctgccgatccagcgcatcgaggacctgtgcggaaaccactggcgcttcgaacgcagc
gacgggcaactgacgcgcatcgtcgaaagcggagtcgacggcctgcagggccgcttcatc
gacgtcgaatcgcgccagggccggatcgagcgcatgcaactgcacgacccggcgaccggc
ctgaaccatccgctggtcggctaccgctaccaggacggcgacctggtcgccgccgtggac
gcgctcgatgccgcgcgtcgcttcgaataccgccagcaccgcatggtccgccacaccgac
cgcgtcggcctgtcgttccactacgcctacgacgcccgctggcgcgtcgtgcgcgcctgg
ggcgacggcggcctgcacgattacaagttccgctacgacgaattgctgggcgaaaccgaa
atcaccgactcgctcggccacgtctccctcgtcaagttcgacgagaacggcctgccgctg
tgcgagatcgacccgctcgacggggtcaccgcgttcgagtacgacgaagtggggcgaacc
accgccgtggtcgatccgatggggttgcggaccgagttcgagtacgacgggcgtgggaat
ctgctgacgttgacgcgggcggatggcggcgttctgcggaccgcgtacgacgccgacgac
cggccggtggcgttgaccgatccggccggcgccgaatggacgcagatatgggatcggcgt
ggcctgttgataggccaacgaacgccgaccggcgccgagtcgcattatgagtacagcgac
gcgggacagatcgcgacctacatcgacccgctcggcgctgcgatgcaggcggtattcgac
cgacacggccaactgcatcgcgcgaccgatccgctcggctcggtggatcgcttcgaacac
gacgcgatgggccggctgttgacccatgtcgatccggcgggacgtacgacgcggtacagc
cacgatggcaaaggacgcctgagccgggtcgtcgccgaaggcggcggccgcgtgcagtgc
gagtacgacggcgaggacaggctgatcgaacatcgcgacagcaacggcgcgatcacccgc
ctggagtactccggcatcgggcaggtggcccggcgcatccagcccgacggtcatgccgtc
ggttacgcctacgacagcgaggagcgcttggtcgcggtcgtcaaccagcgcggggagcga
tacgaacttcggcgcgatgccttgggccgcgtggttgaagagatcgattactgggggcag
agccgtcgctatcggttcgacgccggcggcggcttggtcggttgcgtcgacgcgctgggt
caatccgtggcctatcggaccgatccgctcgggcgcgtcgtccacaagtccgcgcccgac
ctcgagcgtccgggccgacggttcgaggagacgttcaagtacgacaagcgcggccaattc
gtcgagctgaagaatcgtcattgccatgtgctgcgcaagtacgatgccgacggccgcctg
acggaagaaacccagaacggctttcgcgtcgccaacgactacgacgcggccggcaaccgc
atcttgcgcgagaccagcgccggaaaccgcgtggcatgcgagttcgattcgcgcggccag
ccgcgcaggatcgccatcaacgatgaagcgccggtcgagatcgaacgcgatgcgacggga
cgcgcgacggcagaacggatgggtgcgcatatccggcgggacctgagctatgacagggag
ggccgcctggccgctcagtcggtgatgtgcgggcagcagcggctgttcgagacccgctac
ggctacgatccgtccgacaacctgatcgagcgcggcgacagcgagcatggcgtggatcag
tacgcgtacgatccgatggggcgattgctggcgcataccgaccctcgcggcaggatccag
cacttcctcaacgatcccgcgggcgatcgtttgcacgcgcgtgttcgcgagacccgaatg
ctgcaggcggtcggcgaccaagcgcagccttcgcattgggcccgcgaaggcgactacgaa
ggaaggcgctacgtattcgatcgcgccggagacctggttcagcgcagcgatgcgcggacg
ctgccgaccgcatcggaagacgactccggattgcggttgcgctgggatgcgcatcaccgc
ctggtcgaaagccgaaaggacggccaggtcacccgttacggttacgacccgttggggcgg
cgcgtgttcaagcgcaatccgacccagacgacctggtttttctgggacggcgatgcgctg
gtgggcgaggtgcggcaggacaacgacgcagccggcgctccggatccgtccgccgacgcg
aacgtcctggatttcttcgcggcgcgtgcgcgaaagagcgccttccaggggttgtatccg
aaggtcagggagttcgtttactaccctggcggcttcgttccgctggcattgatcgacaag
cgcagcgctgtttccgcgcctgcggcggcggaaaacacaggagcgaacagctcggcgcgt
tcgtcttcgcagacgagcgggccatcgccgctgcgggacgcgcgccggccggtagcggca
cgtgcttccggaactgctgcaggcgccgcggtggagccgcggttggaaagatcgcgggct
cctggctatggcgccttgacggccttgtcgttggggcccgatcggggcaatgcggcgagc
gcgccgcaaggcagtggcgcgaacgcggtttcgccgctcgcgcgcgaatcggccgcggaa
ggcggtgccgccgcgggcgcggcacggccagggtatggcaacctggccggttcgccctcg
ggggcgaaccgggatgcggcggtcgaggcgtcgtcgcatggggtggagccggagcgcacc
gcgtcagtcgtaccgtcgtctcctgtcgcgggagcgctcgccgcgcatgcggacgtcgcc
gatgtcggggacctcggagccgcgcaggtcgatgccgcgagccgcgtggcgatcgaaacg
ctgtccgcggtggtgctgtactaccacgcggacccgaacgggtgctcgacgcgaatgacc
tggcaagacggtcgcgtggcctgggcggcgacctacagcccgtcaggcaaggcgctgcgc
atcgtcgccgatgcggtggacaatccgatccggttgcagggtcaatacttcgatccggaa
acggaactgcactacaaccgctatcgctactacgacagcgacctggcccagtacgtcgga
caggatcccatccgcctgacgggcggcgaagggttgtactcgtatggtttcaatccggtc
ggttggatcgatccgagaggtttgacctgcacgcccgcccaggtcgccaggatgaaggag
ctggtgcaaaaagcgtacgacgacatggtcgcgcaaggtgtcggcaaggccaaacggggg
ccgtgcttttccatcgccatggacatgcggaccggcaggatgagcgcggtctacaacaac
cacgtcgacggcgccgttccgggcaatctgcatccggatatcgagagcaggctgcctggc
gttcccccgtatgtcacggaaaacggtctgccgttgagcaagggcgccggttcgcattcg
gaggtttacgctgtgaacgagttgctcaacaatggcaccggagcaaagctggacgatatc
gcggtgtggtcgatggagtcgttcggaaacaagcacgcgccggtcggcgcggtcaaggac
ccctgcccgcattgcggccatttgctggatggagtgacctatgtccaatga
DBGET
integrated database retrieval system
