KEGG   Lysobacter yananisis: RDV84_04200
Entry
RDV84_04200       CDS       T09342                                 
Symbol
tssI
Name
(GenBank) type VI secretion system tip protein TssI/VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
lya  Lysobacter yananisis
Pathway
lya03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lya00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RDV84_04200 (tssI)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lya02044]
    RDV84_04200 (tssI)
Secretion system [BR:lya02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   RDV84_04200 (tssI)
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 Gp5_C
Other DBs
NCBI-ProteinID: WMT04061
UniProt: A0ABY9PD02
LinkDB
Position
complement(992119..994365)
AA seq 748 aa
MYGYTPASLAQLVRLNQDTRLIRVKSPLDPEAFVIRRMRGVEYVSRPFAFTVELLSLDAH
LELKQVIGQPMRLSLRTQAGEERHFHGYVREFGRTGAEGGMAVYQAELQPWFAFLDCTSN
CRIFQDRTVLEIVEEVFAGYGDLAKCKYDVQAARYPKLPYCVQYNESDFAFVSRLLEDAG
VHYSFEHAEDEHLMFIADDSTQARAIDGAGRVNFVADDAVRDDYGLDRWTTRRRVGTSVQ
ALKSFDFKQPKSPLAVDRPLDIPLGRLPQLESYRYDGAARYVDSAIGDALASLRGEESAW
QTKLFEGAGNHGLLQAGRHFVLHGHYEHSEGEEEERKFLLLQVAHEIRNNFNEDFSVAEG
ASYRCEVACLRRKIPFRPLRATPQPRMPGPQTATVVGPAGEEIHADKYGRVKVQFHWDRL
GSFDERSSCWVRVASPWAGSDMGGVSPPRIDQEVVVDFLDGDPDRPLIVNRVYNELNMPP
FGNEVSGIKSKTVKGAGYNELSMHDADGKQMLNMHAQRDMSTTVLNDQTAAITSNKATTV
GQNQTLSVGVDQTISVGGNRAIAVTGDDTHDVAGARTSTVSGAVAETYKTGQTLTIPAVG
YTETIVGPLSTTLTGDFTSQRTGAWKETVVGTSDRIVTAALTEQYGAGRTTSITGTDLRA
VMGAVEDANEGPRTVSVTGNLEHGVSGTHTAFSGGDMSMGSGSRIALGVGEVSGITITGG
EIVIASAGSTIVINASGVTVNGAKINLN
NT seq 2247 nt   +upstreamnt  +downstreamnt
gtgtacggatacacacccgcctccctggcccaattggtccggctcaatcaggacacgcgc
ctgatccgggtcaaatcgccgctcgatcccgaagccttcgtcatacgccgcatgcgcggc
gtcgaatacgtctcgcgtccgttcgcgttcaccgtcgaactgctgtcgctggacgcgcac
ctggaactcaagcaggtgatcggccagccgatgcgcctgagcctgcgcacgcaagccggc
gaggaacgccatttccacggctatgtacgggagttcggccgcaccggcgccgagggcggc
atggccgtctatcaggccgagctgcagccgtggttcgctttcctcgactgcaccagcaac
tgccggatcttccaggaccggaccgtgctggagatcgtcgaagaagtgttcgccggctac
ggcgacctggccaagtgcaaatacgacgtgcaggcggcccgatacccgaagctgccgtac
tgcgtgcagtacaacgaatccgacttcgccttcgtctcgcgcttgctcgaggatgccggt
gtccactacagcttcgaacacgccgaggacgaacacctgatgttcatcgccgacgactcg
actcaggcccgggccatcgacggcgcggggcgggtgaacttcgtcgccgacgacgcggtg
cgcgacgactacggcctcgaccgctggaccacgcgccgccgagtcggcaccagcgtgcag
gcgctcaagagcttcgacttcaagcagcccaagagtccgctcgcggtcgaccggccgctc
gacattccactcggccgcctgccgcaactggagtcctatcgctacgacggcgcggcgcgc
tacgtcgacagcgcgatcggcgacgccctggccagcctgcgcggagaagaatcggcctgg
cagaccaagctgttcgaaggcgccggcaaccacggcctgctgcaggccggccgccacttc
gtgttgcacggtcattacgaacacagtgaaggcgaagaggaagagcgcaagttcttgctg
ctgcaggtcgcgcacgagatccgcaacaacttcaacgaagacttcagcgtggccgaaggc
gcgagctaccgctgcgaagtcgcctgcctgcggcgcaagatcccgttccgcccgctgcgc
gccacgccgcagccgcgcatgcccggtccgcagaccgcgaccgtggtcggcccggccggc
gaggaaatccatgccgacaagtacggccgggtcaaggtgcagttccattgggaccggctc
ggcagcttcgacgagcgcagctcgtgctgggtgcgggtggccagcccctgggccggcagc
gacatgggcggcgtgtcgccgccgcgcatcgaccaggaggtcgtggtcgatttcctcgac
ggcgatccggaccgtccgctgatcgtcaaccgcgtctacaacgagctcaacatgccaccg
ttcggcaacgaggtcagcggcatcaagtccaagaccgtcaagggcgcgggctacaacgaa
ctgagcatgcacgacgccgacggcaagcagatgctcaacatgcacgcccagcgcgacatg
agcaccacggtgctcaacgaccagaccgcggcgatcaccagcaacaaggcgaccacggtc
gggcagaaccagaccctcagtgtcggcgtcgaccagaccatctcggtcggcggcaaccgc
gccatcgccgtcaccggcgacgacacccacgacgtcgccggcgcgcgcaccagcaccgtc
agcggcgcggtggccgagacctacaagaccggccagaccctgaccattcccgcggtcggc
tataccgaaaccatcgtcggtccgctgtcgaccacgctgaccggcgacttcaccagccaa
cgcaccggcgcgtggaaggaaaccgtcgtcggtacctccgatcgcatcgtcaccgcggcg
ctgaccgagcagtacggcgccggtcgcaccacctcgatcaccggcaccgacctgcgcgcg
gtgatgggcgcggtcgaggacgccaacgaaggcccgcgcacggtctcggtgaccggcaac
ctcgagcatggcgtcagcggcacccacacggcgttctccggcggcgacatgagcatgggc
tcgggctcgcgcatcgccctgggcgtgggcgaggtctcgggcatcaccatcaccggcggc
gagatcgtgatcgcctcggccggctcgaccatcgtcatcaatgcctcgggcgtgaccgtc
aacggcgccaagatcaacctcaactga

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