Lysobacter yananisis: RDV84_04990
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Entry
RDV84_04990 CDS
T09342
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
lya
Lysobacter yananisis
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lya02000
]
RDV84_04990
Transporters [BR:
lya02000
]
Other transporters
Pores ion channels [TC:
1
]
RDV84_04990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
WMT04205
UniProt:
A0ABY9PAX3
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All DBs
Position
complement(1170542..1173457)
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AA seq
971 aa
AA seq
DB search
MKPSRRHVLAKAIQLSLLVALPGVAAAQDAAPAKDPTTLDSVQVTGTRIKKAEIESQVPV
QTLSRDDIERTGLTSLGDIVQELTGAGSALNTKFNSSGNFGFSPNGDGIGAGSAQVDLRH
LGPKRVLVLVDGMRWVNESSASGVGAATDLNTIPLAIVERIEVLEDGASSLYGSDAIAGV
VNIITRRNFDGGQISLNYGQYGKGDGELQGVDLAWGYNTDRANLFLGLSYVDQDPVFSRD
RKVSRVPVPGLGVETGSSATPNGRFIFTDPRCPAVDSDDDPSTPPVNMCNITTPNGSSFP
NGVRFPQDFIPFGGANRYNFAAENMLLTPSKRTGAFGQFRYHFSDNVQGYLKALYNRRES
VNQAAPEPIFLGLDAGTGNPWSERITISRLNPYNPFGIDLTSEGANPNLITLARRPVEGG
PRIFEQQVDTQYVAGGLEGSFDAGDRTFFWDVNAAYSRNKADQTNRGSYNIRNINIALGD
PAVCAATPGCVPLNLFGGPGTITPQMLSWISPIIRDRSEQKLKTFTANFSGDLFNLWAGP
LSFAAGYEYRKYEGSYSPDPITVAGYYNGTQSLPTRGTYDVNEAYVELNLPLIKEGSFGK
SLDLSLAGRYSDYSTFGGQFTPKYGLRWQVADEFLLRTTYAEGFRAPSIGELYGSASRAD
LQLSDPCLISITGSPPTGNRANCAALGVPAGAAQANSQISVQTGGNADLEPETARSFTAG
FVYSPAWAADSAWSDKFDFEVTYYRHSLEGAVQAIDAQTQLNLCVQTLDPLYCNGITRSS
VGGISSFENKLTNLGSIKTSGWDVDFFWTLPESSLGQFKLAWQNTWVTQYDAVGAAGQLQ
PRRPGVEVNDSAIPEWSSNATLSWKRNAWTGSWTVRHISELTETCQASALESPYCDNSVT
GANKLSPTTYHDIQLGYHFELLKGLQVTGGVNNLFDKDPPVCLSCSLNGYDASTYDIPGG
RFFYVRADLRF
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgtcgcgtcgccatgtcctggcgaaagccatccaattgtccctgctggtcgcg
ctgcccggcgtcgccgccgcgcaggacgccgcccccgccaaggaccccaccacgctcgac
tcggtccaggtcaccggcacccgcatcaagaaggccgagatcgaaagccaggtcccggtc
cagaccctcagccgcgacgacatcgaacgcaccggcctgacctcgctcggcgacatcgtg
caggaactcaccggcgccggctccgcgctcaacaccaagttcaattcctcgggcaacttc
ggcttctcgcccaacggcgacggcatcggcgcgggctcggcccaggtcgacctgcgccac
ctcggtcccaagcgcgtgctggtcctggtcgacggcatgcgttgggtcaacgaatcctcg
gcctcgggcgtgggcgcggcgaccgacctcaacaccatcccgctggccatcgtcgagcgc
atcgaagtgctcgaagacggcgcgtcctcgctgtacggctccgacgccatcgccggcgtg
gtcaacatcatcacccgccgcaacttcgacggcggccagatcagcctcaactacggccag
tacggcaagggcgacggcgagctgcagggcgtcgatctggcgtggggctacaacaccgac
cgcgccaacctgttcctcggcttgagctacgtcgaccaggatccggtgttctcgcgcgac
cgcaaggtctcgcgcgtgccggtgccgggcctgggcgtggagaccggcagctcggccacg
ccgaacggccgcttcatcttcaccgacccgcgttgcccggcggtcgacagcgacgacgat
ccgtccacgccgccggtcaacatgtgcaacatcaccacgcccaacggctccagcttcccc
aacggcgtgcgtttcccgcaggacttcattccgttcggcggcgccaaccgctacaacttc
gccgccgagaacatgctgctgacgccgtccaagcgcaccggcgcgttcggccagttccgc
taccacttcagcgacaacgtgcagggttatttgaaggccctgtacaaccgccgcgagtcg
gtcaaccaagccgcgcccgagccgatcttcctcggcctggacgccggcaccggcaacccg
tggtccgagcgcatcaccatctcgcgcctgaacccgtacaaccccttcggcatcgacctg
acctccgagggcgccaacccgaacctgatcacgctcgcgcggcgtccggtcgagggcggc
ccgcgcatcttcgaacagcaggtcgacacccagtacgtggccggcggcctggaaggcagc
ttcgacgcgggcgaccgcaccttcttctgggacgtcaacgccgcctacagccgcaacaag
gccgaccaaaccaaccgcggcagctacaacatccgcaacatcaacatcgccctcggcgat
ccggcggtgtgcgccgcgaccccgggctgcgtgccgctgaacctgttcggcggcccgggc
acgatcaccccgcagatgctcagctggatcagcccgatcatccgcgaccgcagcgagcag
aagctcaagaccttcaccgcgaacttctccggcgacctgttcaacctgtgggcgggcccg
ctgtcgttcgcggccggttacgagtaccgcaagtacgaaggttcctactcgcccgatccg
atcaccgtcgccggctactacaacggcacccagtcgctgccgacccgcggcacgtacgac
gtcaacgaggcctatgtcgagttgaacctgccgctgatcaaggaaggttcgttcggcaag
agcctggacctgagcctggccggccgctattcggactactcgaccttcggcggccagttc
acgcccaagtacggcctgcgctggcaggtcgccgacgagttcctgctgcgcaccacctac
gccgaaggcttccgcgcgccgtcgatcggcgaactgtacggctcggccagccgcgccgac
ctgcagctcagcgatccctgcctgatctcgatcaccggctcgccgccgaccggcaaccgc
gccaactgcgccgcgctcggcgtgccggccggcgccgcccaggccaacagccagatctcg
gtgcagaccggcggcaacgcggacctggaaccggaaaccgcgcgcagcttcaccgccggc
ttcgtctacagcccggcctgggccgcggattcggcgtggtcggacaagttcgacttcgag
gtcacctactaccgccactcgctggaaggcgcggtgcaggcgatcgatgcgcagacccag
ctcaacctgtgcgtgcagaccctcgacccgctgtactgcaacggcatcacccgttccagc
gtcggcggcatctccagcttcgaaaacaagctgaccaacctgggttcgatcaagacctcc
ggctgggatgtggacttcttctggaccctgccggaaagctcgctcggccagttcaagctg
gcctggcagaacacctgggtgacccagtacgacgcggtcggcgccgccggccagttgcag
ccgcgccgcccgggcgtggaagtcaacgacagcgcgattccggagtggagctcgaacgcg
accctgtcgtggaagcgcaacgcctggaccggttcgtggaccgtgcgccacatctccgaa
ctgaccgagacctgccaggcctcggcgctggagtcgccgtactgcgacaactccgtgacc
ggcgcgaacaagctctcgccgaccacgtaccacgacatccagctgggctaccacttcgaa
ctgttgaagggcctgcaggtcaccggcggcgtcaacaacctgttcgacaaggacccgccg
gtgtgcctgtcgtgctcgctcaacggctacgacgcgtccacctacgacatcccgggcggg
cgtttcttctacgtgcgcgcggatctgcggttctga
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