Lysobacter yananisis: RDV84_06000
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Entry
RDV84_06000 CDS
T09342
Name
(GenBank) spore coat U domain-containing protein
KO
K27078
spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
Organism
lya
Lysobacter yananisis
Pathway
lya02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RDV84_06000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lya02044
]
RDV84_06000
02035 Bacterial motility proteins [BR:
lya02035
]
RDV84_06000
Secretion system [BR:
lya02044
]
Chaperone-usher system
Type 1 pilus assembly protein
RDV84_06000
Bacterial motility proteins [BR:
lya02035
]
Pilus system
Fimbrial proteins
RDV84_06000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCPU
Motif
Other DBs
NCBI-ProteinID:
WMT04387
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All DBs
Position
1417258..1418277
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AA seq
339 aa
AA seq
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MSARAAILRCALALFAALALAAPAHAATSCTGSMTNLNFAATTGAAVDATATLTVTCSTG
ALSLLARARVNMCVSIFSGTDGGGTLAPRRMTNTPGDAMQMQLYTDSARSQIWGARGNAT
VPNFLPLQFDYEVIAIGGSQTLTATLYGRIPAQTALNAGTYRNRFTAAADTRIEFQYAEA
LLGTPPMPASCVSGGSTGTPSSFPFTVNGSVPNTCALSPKPVPDLAFGSVPGYVTANVDR
TTAIGLTCTGRTAWQLGIGNGLNASGNIRRMRSAGGQFVPYELYRDSGRSQRWGTTLGTD
TVSGTGTGAAQSQTVYGRVAPQTATPGSYTDTVVVTVTY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcgcgccgcgatcctgcgctgcgcgctggccttgttcgccgcgctggccttg
gccgcgcccgcgcacgcggcgacctcgtgcacggggagcatgaccaacctcaacttcgcc
gcgaccaccggcgccgccgtcgacgccaccgccaccctcaccgtcacctgctcgaccggc
gcgctgtcgctgctggcgcgggcccgggtcaacatgtgcgtgagcatcttcagcggcacc
gacggcggcggcaccctggcgccgcggcgcatgaccaacaccccgggcgacgcgatgcag
atgcagctctacaccgacagcgcgcgcagccagatctggggcgcgcgcggcaacgcgacc
gtgccgaacttcctgccgctgcagttcgactacgaagtgatcgcgatcggcggcagccaa
accctgaccgcgaccttgtacggccgcatccccgcgcagaccgcgctcaacgccggcacc
taccgcaaccgcttcaccgccgccgccgacacccgcatcgaattccaatacgccgaagcg
ctgctcggcaccccgccgatgccggcctcctgcgtcagcggcggcagcaccggcacgccg
tcgagctttcccttcaccgtcaacggctcggtgcccaacacctgcgcgctgagccccaag
ccggtacccgacctggccttcggcagcgtccccggttacgtcaccgccaacgtcgaccgc
accaccgcgatcggcctgacctgcaccggccgcaccgcctggcaactgggcatcggcaac
ggcctcaacgccagcggcaacatccgccgcatgcgcagcgccggcggtcagttcgtgccc
tacgaactctaccgcgacagcggccgcagccagcgctggggcacgacgctgggcaccgat
acggtcagcggcaccggcaccggcgcggcgcaatcgcaaacggtgtacggacgcgtggcg
ccgcagaccgcgacgccgggtagctacaccgacaccgtcgtcgtcaccgtcacctactga
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