Lysobacter yananisis: RDV84_08485
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Entry
RDV84_08485 CDS
T09342
Name
(GenBank) ABC transporter ATP-binding protein
KO
K10823
oligopeptide transport system ATP-binding protein
K15583
oligopeptide transport system ATP-binding protein
Organism
lya
Lysobacter yananisis
Pathway
lya01501
beta-Lactam resistance
lya02010
ABC transporters
lya02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RDV84_08485
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RDV84_08485
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RDV84_08485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lya02000
]
RDV84_08485
Transporters [BR:
lya02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
RDV84_08485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_22
AAA_29
AAA_16
oligo_HPY
CbiA
nSTAND1
nSTAND3
AAA_5
RsgA_GTPase
SbcC_Walker_B
AAA_30
NACHT
AAA_18
Motif
Other DBs
NCBI-ProteinID:
WMT04863
LinkDB
All DBs
Position
2011144..2012694
Genome browser
AA seq
516 aa
AA seq
DB search
MSALLELRELRVSLPGRELLGPLDLELRAGQCLGVVGESGSGKSLTALSLLGLLPPPLRA
QGRLRVDGADIALASPAHARLRGRTLAWVPQDPLASLHPLRRVGAQLVETLRAVRGLPAG
DAQRQAQSLLERVQLPEPAAALARYPHQFSGGQRQRIAIALALATEPRGLIADEPTSALD
ARIARDILDLLDRLRREDGLALLLISHDLPLVGAYAQRLLVLRRGAAIERGDAAQVFAAP
AQAYTRELIAADRIAPLPAPTAADAPVLLRGEGLRMRYPRAPRAALDGVDIELRRGEGLA
LVGESGSGKSTLGRALLRLLRGAQGRVVFDGVDLAMLDAAALRRLRARTGVVFQDPYASL
DPRLSVAEIVAEPLRIHRHGDAGARRARAAELLRAVGLDEAMLERYPHQFSGGQRQRIAI
ARALATRPQLLVCDEAVSALDAHHRAAVLQLLARLKREHGLALLFVTHDLSAAAAVAERI
AVLEAGRIVESGTTAQVLAAPAHAHTRALLAARATL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctgctggaactgcgcgaactgcgggtgtcgctgcccgggcgcgaactgctc
ggcccgctcgacctggaactgcgcgccgggcaatgcctgggcgtggtcggcgaaagcggc
agcggcaagagcctgaccgcgctgtcgctgctgggcctgttgccgccgccgctgcgcgcg
cagggacggttgcgcgtggacggcgcggacatcgccttggcctcgcccgcgcacgcgcgc
ctgcgcggccgcaccctggcctgggtgccgcaggacccgctggcttcgctgcatccgctg
cgccgggtcggcgcgcaactggtcgaaaccctgcgcgcggtgcgcggtttgccggccggc
gacgcgcagcggcaggcgcagtcgctgctcgaacgcgtgcaactgcccgaaccggccgcg
gcgctggcgcgctatccgcaccagttctccggcggccagcgccagcgcatcgccatcgct
ttggcgctggcgaccgagccgcgcgggttgatcgccgacgaacccacctcggcgctggac
gcgcgcatcgcccgcgacatcctcgacctgctcgaccgcctgcgccgcgaggacggactg
gccctgctgttgatcagccacgacctgccgctggtcggcgcctacgcgcagcgactgctg
gtgctgcggcgcggcgcggcgatcgagcgcggcgacgccgcgcaggtgttcgccgcgccc
gcgcaggcctacacccgcgagctgatcgccgccgaccggatcgcgccgctgccggcgccc
accgccgccgacgcgccggtgctgctgcgcggcgagggcctgcgcatgcgctacccgcgc
gcgccgcgcgccgcgttggacggggtcgacatcgaattgcgccgcggcgaaggcctggcc
ctggtcggcgagagcggcagcggcaagagcacgctcggccgcgcgttgctgcggctgttg
cgcggtgcgcaggggcgggtggtgttcgacggtgtcgacctggcgatgctggacgccgcc
gcgctgcgccgcctgcgcgcgcgcaccggcgtggtgttccaggacccttacgcctcgctg
gacccgcggctgagcgtcgccgagatcgtggccgagccgctgcgcatccatcgccacggc
gatgccggcgcgcgccgcgcccgcgccgccgaactgctgcgcgcggtcggtctggacgag
gccatgctcgaacgctacccgcaccagttctccggcgggcagcgccagcgcatcgccatc
gcccgcgcattggcgacgcggccgcagctgttggtctgcgacgaagcggtgtcggcgctg
gatgcgcaccatcgcgcggcggtgctgcagttgctggcgcggctcaagcgcgagcacggg
ctggcgctgctgttcgtcacccacgacctgtcggcggccgccgcggtggccgagcgcatc
gcggtgctggaggcggggcggatcgtcgagtccggcacgacggcgcaggtgctggcggcg
ccggcgcacgcgcatacgcgggcgttgctggcggcgcgcgcgacgttgtga
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