Lysobacter yananisis: RDV84_09080
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Entry
RDV84_09080 CDS
T09342
Symbol
ppc
Name
(GenBank) phosphoenolpyruvate carboxylase
KO
K01595
phosphoenolpyruvate carboxylase [EC:
4.1.1.31
]
Organism
lya
Lysobacter yananisis
Pathway
lya00620
Pyruvate metabolism
lya00680
Methane metabolism
lya00710
Carbon fixation by Calvin cycle
lya00720
Other carbon fixation pathways
lya01100
Metabolic pathways
lya01120
Microbial metabolism in diverse environments
lya01200
Carbon metabolism
Module
lya_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
RDV84_09080 (ppc)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
RDV84_09080 (ppc)
00720 Other carbon fixation pathways
RDV84_09080 (ppc)
00680 Methane metabolism
RDV84_09080 (ppc)
Enzymes [BR:
lya01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.31 phosphoenolpyruvate carboxylase
RDV84_09080 (ppc)
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Gene cluster
GFIT
Motif
Pfam:
PEPcase
PEPcase_2
DinB_2
Motif
Other DBs
NCBI-ProteinID:
WMT04978
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Position
2158015..2160777
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AA seq
920 aa
AA seq
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MTDSNDESLRAADPAADRAADFAPTDALLREDVKTLGALVGEILAEQRGQGFLDDVERLR
RAAIRRREAGEPVDALAAALADIDLEQAADLVRAFATYFQAVNLAERVHRIRRRRDYERS
GAGAQPGGLRDSLAALARQGVSAEEVAALLPRLRIEPVFTAHPTEAVRRALLEKERTIVE
CLVADIDRGRTPAERRADRERIRLALTASWQTAEAPAAKPSVADEFEHVGFYLSDVLYRV
LPVYYEVFEEALRETYGDAPALPDVLGFGTWVGGDMDGNPNVGADTVAATLAGQRALVLG
AYRRDLASLEELLSQSVHRVRVDDAVLAKVEDYRYLLPKAAALLKPRHADMPYRNLLGLM
SARLQATLDESLHGYPDAAAFLADIDLIERSLAAHQGAHAGGFAVRRLRRRAECFGFHLA
GLDLRQDSATHDAALAALLDQPEWAALDVAARAARLHRLLDGEAPPARPAAPAAQSTLEV
FRAVARLRPRFGARAFGPYIVSMSRSAADALAVLALARTAGCADDQGRVPLDVAPLFETV
DDLDAAADTLRALFADPVYRGHLRARGDRQVVMLGYSDSAKDGGMVASRWALQQTQIALT
ALAADSGVRIAFFHGRGGSISRGGGKTERAVIAAPRGSVDGYLRLTEQGEVIHRKYGIRA
LALRNLEQTSGAVLRATLRPRAPEPREAGWRGIAGRLALDAREHYRALVHEDPQFPAYFR
AATPIDVIERLRIGSRPAKRAGTGDISSLRAIPWVFAWSQNRAGLTAWYGVGTGLERALA
QHGRDALAEMARDWPFFGTLIDDLEMVLAKSDPAIFERYSRLAEALPEGDLHARFHPGIA
AEFERTRAAVLAIKGSDELLRGDHRLRQSIRLRNPYVDPISLLQVDLLARWRAADRPDDA
LLQALVATVNGIAAGVQNTG
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacagcaacgacgaatccttgcgcgcggccgacccggccgccgaccgcgcggcc
gatttcgcgcccaccgacgccctgttgcgcgaggacgtcaaaacgctcggcgccctggtc
ggcgagatcctcgccgagcaacgcggccagggcttcctcgacgatgtcgagcggctgcgc
cgcgccgcgatccgccgccgcgaggccggcgagccggtcgacgcgctggccgcagcgctg
gccgacatcgacctggagcaggccgccgatctggtgcgcgcgttcgccacgtatttccag
gcggtcaacctggccgagcgcgtgcaccgcatccgccgccgccgcgattacgagcgcagc
ggcgccggcgcccagcccggcggcctgcgcgattcgctggcggcgctggcgcggcagggc
gtcagcgccgaggaagtggcggcgctgctgccgcggctgcggatcgagccggtgttcacc
gcccatcccaccgaagcggtgcggcgcgcgttgctggagaaggagcgcaccatcgtcgaa
tgcctggtcgccgacatcgaccgcggccgcaccccggccgagcgccgcgccgaccgcgag
cgcatccgcctcgcgctgaccgcgagttggcagaccgccgaggcgccggcggccaagccc
agcgtcgccgacgagttcgagcacgtcggcttctatctgtccgacgtgctctaccgggtg
ctgccggtctactacgaagtgttcgaggaggcgctgcgcgaaacctacggcgacgcgccg
gcgctgccggacgtgcttggtttcggcacctgggtcggcggcgacatggacggcaatccc
aatgtcggcgccgacaccgtcgccgccacgctcgccggccagcgcgcgctggtgctgggc
gcgtaccggcgcgatctggcttcgctggaagaactgctgagccagtcggtgcatcgcgta
cgcgtcgacgacgcggtgctggccaaggtcgaggactatcgctacctgttgcccaaggcc
gccgcgctgctcaagccgcgccacgccgacatgccttaccgcaacctgctggggctgatg
tcggcgcggctgcaggcgacgctggacgaaagcctgcacggctatcccgatgcggccgcg
ttcctggccgacatcgatctgatcgaacgcagcctggccgcgcaccagggcgcgcacgcc
ggcggcttcgcggtgcggcgcctgcgccggcgcgcggaatgtttcggtttccacctggcc
gggctcgacctgcgccaggattcggccacccacgacgccgcgttggcggcgttgctggac
cagcccgagtgggccgcgctcgacgtcgccgcgcgcgccgcgcgcctgcatcgcctgctc
gacggcgaggcgccgccggcgcgtccggccgcgcccgcggcgcagtcgacgctggaagtg
ttccgcgcggtcgcgcgcctgcgcccgcgcttcggcgcgcgcgcgttcggcccgtacatc
gtcagcatgagccgcagcgccgccgacgcgctggcggtgctggcgctggcgcgcaccgcc
ggctgcgccgacgaccagggccgagtgccgctggacgtggcgccgctgttcgagaccgtc
gacgacctcgacgccgccgccgacaccttgcgcgcgttgttcgccgacccggtctaccgc
ggccacctgcgcgcgcgcggcgaccgccaggtggtgatgctgggctattccgacagcgcc
aaggacggcggcatggtcgcctcgcgctgggccctgcagcagacccagatcgcgctgacc
gcgctggccgccgacagcggcgtgcgcatcgccttcttccacggccgcggcggctcgatc
agccgcggcggcggcaagaccgagcgcgcggtgatcgccgcgccgcgcggttcggtcgac
ggctatctgcggttgaccgagcagggcgaggtgatccatcgcaagtacggcatccgcgcg
ctggccctgcgcaacctggaacagaccagcggcgcggtgctgcgcgcgaccctgcgcccg
cgcgcgccggagccgcgcgaggccggctggcgcggcatcgccggccggctcgcgctcgac
gcgcgcgaacactaccgcgcgctggtgcacgaagacccgcagttcccggcctacttccgc
gccgccacgccgatcgacgtgatcgaacgcctgcgcatcggctcgcgtccggccaagcgc
gccggcaccggcgacatctcctcgttgcgcgcgatcccgtgggtgttcgcgtggtcgcag
aaccgcgccggactgaccgcctggtacggcgtcggcaccggcctggaacgcgccctggcg
cagcacggccgcgacgcgctggcggagatggcgcgcgactggccgttcttcggcaccttg
atcgacgacctggaaatggtcctggccaagtccgacccggcgatcttcgaacgctactcg
cgcctggccgaagcgctgcccgaaggcgacctgcacgcgcgtttccacccaggcatcgcc
gccgaattcgaacgcacccgcgccgcggtgctggcgatcaagggcagcgacgaactgctg
cgcggcgaccatcgcctgcgccagtcgatccggctgcgcaatccgtatgtcgatccgatc
agcctgttgcaggtcgatctgctcgcgcgctggcgcgccgccgaccgccccgacgacgcg
ctgctgcaggcgttggtggcgacggtgaacggcattgcggcgggggtgcagaacaccggt
tga
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