Lysobacter yananisis: RDV84_10605
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Entry
RDV84_10605 CDS
T09342
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
lya
Lysobacter yananisis
Pathway
lya00550
Peptidoglycan biosynthesis
lya01100
Metabolic pathways
lya01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RDV84_10605 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RDV84_10605 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lya01011
]
RDV84_10605 (mrdA)
Enzymes [BR:
lya01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RDV84_10605 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
lya01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RDV84_10605 (mrdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
WMT05268
UniProt:
A0ABY9PDW7
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All DBs
Position
2524029..2526293
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AA seq
754 aa
AA seq
DB search
MGPRRRLLNRRPRVLKNTAAEADQFRLRAAVAFFFVLIGVVGLGFWYFRLQVWQHDDYAM
RSEQNRVKLRPVVPGRGLIYDRRGRILADNVPAFRIEVTPSEAGDSEKWLPQLARVIALT
PEDISRFEAERKATRGFKPIVLKLRVSDEEVAAFAVDRWRFPGVELVSYLNRRYPYGELF
AHVIGYVGRIDTKDQEALGVNAGVLTHIGKTGLERSYEQQLRGQVGYEQIETNVDGRPIR
QVGHVPAKPGADLRLSIDLDLQRAMVTAFGDMDGSAVAVDPRTGEVLAMVSLPSYDSNLF
VNGISSANYKALNEDPSRPQFNRNVLGGGPPGSTMKPFMALAGLDSGARRAEDKILSTGE
FHIPGQKRGYRDSHGGGHGWVDLRESIAQSVNTYYYKLALDMGIQKVDQYMLRYGFGQKT
GIDLLGENVGILPSPEWKAKRNKKEGWYPGETVIAGIGQGYWVVTALQLARGTAAIADGG
TLRQLHLVREIRTGYESPWLPKELNEPTRITDNPAHLQAVHEGMESTIHGGRGTARIMAR
GAPYRMAGKTGTAQKVSRKGNVSLNPHSLPYHLRHQALFVGYAPAENPTIAVAVVVEHGG
YGGSTAAPIARKIFDAWLLGKMPEAPAGKDGKPAPTVAPLAVAPGSAPTVSPGQAPGEGA
AVPAELQVVAVPVNGAWAKAVAMANARVAAQPGHVPQAAAGAESGLQANLPGYVPPPEPA
ADGAAAPARHDDALIEPNLDPEDDDVSPTVEPQR
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgggcccgcgccgccgcctgctcaaccgccgcccgcgcgtgctcaagaacaccgcggcc
gaggccgaccagttccgcctgcgcgccgcggtcgcgttcttcttcgtcctgatcggcgtg
gtcggcctgggcttctggtacttccgcctgcaggtctggcaacacgacgactatgcgatg
cgctcggagcagaaccgggtcaagctgcgcccggtcgtgcccggacgcggcctgatctac
gaccgccgcggccgcatcctcgccgacaacgtccccgcgttccggatcgaagtgaccccg
tcggaagccggcgacagcgaaaaatggctgccgcagctggcgcgggtgatcgcgctgacc
cccgaggacatctcgcgcttcgaagccgagcgcaaggccacccgcgggttcaagccgatc
gtgctgaagctgcgcgtcagcgacgaggaagtcgccgcgttcgcggtcgaccgctggcgt
ttccccggcgtcgagctggtgtcctacctcaatcgccgctacccgtacggcgagctgttc
gcgcacgtgatcggctacgtcggccgcatcgacaccaaggaccaggaagcgctcggggtc
aacgccggcgtgctgacccacatcggcaagaccggcctggagcgttcctacgaacagcaa
ctgcgcggccaggtcggctacgagcagatcgaaacgaatgtcgacggccgcccgatccgc
caggtcggccacgtaccggccaagcccggcgccgacctgcgcctgagcatcgacctggac
ctgcagcgcgcgatggtcaccgcgttcggcgacatggacggctcggcggtcgcggtggac
ccgcgcaccggcgaagtgctggcgatggtcagcctgccgagctacgacagcaatctgttc
gtcaacggcatctccagcgccaactacaaggcgctcaacgaagatccctcgcgcccgcag
ttcaaccgcaacgtactcggcggcggcccgccgggttcgacgatgaagccgttcatggct
ttggccggcctcgacagcggcgcgcgccgcgccgaggacaagatcctgtcgaccggcgag
ttccacatccccggccagaagcgcggctaccgcgactcgcacggcggcggccacggctgg
gtcgacctgcgcgaatccatcgcccagtcggtcaacacctactactacaagctcgccctc
gacatgggcatccagaaggtcgaccaatacatgctgcgctacggcttcggccagaagacc
ggcatcgacctgctcggcgagaacgtcggcatcctgccgtcgccggagtggaaggccaaa
cgcaacaagaaggaaggctggtacccgggcgaaaccgtcatcgccggcatcgggcaaggt
tactgggtggtgaccgcgctgcagctcgcgcgcggcaccgccgcgatcgccgacggcggc
accttgcgccagctgcacctggtgcgcgagatccgcacgggttacgaatcgccgtggctg
ccgaaggaactcaacgaaccgacgcgcatcaccgacaaccccgcgcacttgcaggccgtg
cacgagggcatggaatcgaccatccacggcggccgcggcaccgcgcggatcatggcgcgc
ggcgcgccgtaccgcatggccggcaagaccggcaccgcgcagaaggtcagccgcaagggc
aacgtcagcctcaatccgcattcgctgccgtaccacctgcgccaccaggcgctgttcgtc
ggctacgcgccggccgagaacccgaccatcgcggtcgcggtggtggtcgaacacggcggc
tacggcggcagcaccgccgcgccgatcgcgcgcaagatcttcgacgcgtggctgctcggc
aagatgcccgaagcgccggcgggcaaggacggcaagcccgcgccgaccgtggccccgctc
gcggtcgcgcccggttccgcgccgaccgtctcgcccggccaggcgccgggcgaaggcgcc
gcggtgccggccgaactccaggtcgtggcggtgccggtcaacggcgcctgggccaaggcg
gtggcgatggccaacgcccgcgtcgccgcgcagccgggccacgtgccgcaggccgcggcc
ggcgccgaatccggcctgcaggcgaacctgcccggctacgtgccgccgcccgaaccggcc
gccgacggcgccgcggcgcccgcgcgccacgacgacgccctgatcgaacccaacctcgac
cccgaagacgacgacgtgagcccgaccgtggagccgcagcggtga
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