Lysobacter yananisis: RDV84_12220
Help
Entry
RDV84_12220 CDS
T09342
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
lya
Lysobacter yananisis
Pathway
lya00740
Riboflavin metabolism
lya00790
Folate biosynthesis
lya01100
Metabolic pathways
lya01110
Biosynthesis of secondary metabolites
lya01240
Biosynthesis of cofactors
Module
lya_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
RDV84_12220 (ribB)
00790 Folate biosynthesis
RDV84_12220 (ribB)
Enzymes [BR:
lya01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
RDV84_12220 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
RDV84_12220 (ribB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-ProteinID:
WMT05572
UniProt:
A0AA51XKB7
LinkDB
All DBs
Position
2883858..2885018
Genome browser
AA seq
386 aa
AA seq
DB search
MSFATVPELLEEIRAGRMVVIVDDEDRENEGDLIMAAELVRPADINFMVTHARGLVCLSL
MRERCLQLGLGPMVRDNTSPHHTNFTVSIEAAEGVTTGISAYDRAHTVRTAVRPDAKPSD
LAQPGHIFPLMSQPGGVLSRAGHTEAASDLAMLAGLEPAGVLVEVLNPDGSMARRPELEQ
FAAEHGLKIGSIEELIRYRLATEHTVERVDAREIETEHGPFRLLSYRDRLTRAVHFALQR
GEPDADAPTLVRVHVQNPLADALHWRRPDFGPAVGDVLAAIAREGRGALVLLSDHADPDA
LLARVREQPGAHEPHAGEHDEAPAAAVPPPTRGHALAEWRRNGAGGQILADLGLGKLRVL
GTPRKQIGLAGFGLEVVEYVDIARLG
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgccaccgtccccgaactgctcgaggaaatccgcgccggccgcatggtcgtc
atcgtcgacgacgaagaccgcgagaacgaaggcgacctgatcatggccgccgagctggtg
cgtccggccgacatcaacttcatggtcacccacgcccgcgggctggtgtgcctgtcgctg
atgcgcgagcgctgcctgcaactcggcctcggcccgatggtgcgcgacaacacttcgccg
caccacaccaacttcaccgtcagcatcgaggcggccgagggcgtcaccaccggcatctcc
gcctacgaccgcgcccacaccgtgcgcaccgcggtgcggcccgacgccaagccgtcggat
ctcgcccagcccggccacatcttcccgctgatgtcgcagcccggcggcgtgctcagccgc
gccggccacaccgaggcggcgagcgacctggcgatgctcgcgggcctggagccggccggc
gtgctggtcgaggtgctcaatcccgacggcagcatggcgcggcgcccggagttggagcag
ttcgccgccgagcacggcttgaagatcggttcgatcgaggaactgatccgttatcgcctc
gccaccgagcacacggtcgagcgggtggacgcgcgcgagatcgagaccgagcacggcccg
ttccgcttgctgagctaccgcgaccgcctgacccgcgccgtgcacttcgccctgcagcgc
ggcgaacccgacgcggacgcgccgaccttggtgcgcgtgcacgtgcagaacccgctggcc
gacgcgctgcactggcgccggcccgacttcggcccggcggtgggcgacgtgctcgccgcg
atcgcgcgcgaaggccgcggcgcgctggtgctgctgtccgaccacgccgaccccgacgcg
ctgctggcgcgggtgcgcgagcagcccggcgcgcacgagccgcacgccggagagcacgac
gaagcgccggccgcggccgtgccgccgccgacccgcggccacgccctggccgaatggcgg
cgcaacggcgccggcggccagatcctggccgacctgggcctgggcaagctgcgcgtgctc
ggcaccccgcgcaagcagatcggcctggccgggttcgggctcgaggtagtcgagtacgtg
gacatcgcccgcctgggctga
DBGET
integrated database retrieval system
