Lysobacter yananisis: RDV84_14240
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Entry
RDV84_14240 CDS
T09342
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
lya
Lysobacter yananisis
Pathway
lya02020
Two-component system
lya02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RDV84_14240
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RDV84_14240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lya03000
]
RDV84_14240
Transcription factors [BR:
lya03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
RDV84_14240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
MarR_2
MarR
HVO_A0261_N
HTH_29
Crp
DUF977
HTH_24
DUF1670
Motif
Other DBs
NCBI-ProteinID:
WMT01156
UniProt:
A0ABY9P2R9
LinkDB
All DBs
Position
complement(3345998..3346702)
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AA seq
234 aa
AA seq
DB search
MTEPAPLPADPWLRDLSPEVVAHLQAMSVRRRLRDGELLYARGDAAEGLYGVVSGRIRLS
VPTAGGREMLIVQFEPGSWFGEVSMFDGEPRPQDARAVGDSEILLLPRTRFLALLEQHPE
LYRGFTRLLCRKLRTALDYVEDALTLPLAARLGKRLLELARVYGVEREEGRLIDLPLPQD
DLANMLGATRQSVSKQLKAWEQRGWIALRYRHVVVRDAQALERALAQDAARGAR
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcccgcgcccctgcccgccgatccgtggctgcgcgacctctcgcccgaggtg
gtcgcgcacctgcaggcgatgtcggtgcgccggcgcctgcgcgacggcgagctgctgtac
gcgcgcggcgacgcggccgaggggctgtacggcgtggtgtccgggcgcatccgcctgagc
gtgccgaccgcgggcgggcgcgagatgctgatcgtgcagttcgagcccggcagctggttc
ggcgaagtgtcgatgttcgacggcgaaccgcgaccgcaggacgcgcgcgcggtcggcgac
agcgagatcctgctgctgccgcgcacgcgcttcctggcgctgctggagcaacaccccgag
ctgtaccgcggcttcacccggctgctgtgccgcaagctgcgcaccgcgctggactacgtc
gaagacgcgctgaccctgccgctggccgcgcgcctgggcaagcgcctgctggaactggcg
cgggtgtatggggtcgagcgcgaggaaggccggctgatcgacctgccgctgccgcaggac
gacctcgccaacatgctcggcgcgacccgccagagcgtgagcaagcagctcaaggcctgg
gagcagcgcggctggatcgcgctgcgctaccgccatgtggtggtgcgcgatgcgcaggcg
ctggaacgcgcgctggcgcaggacgccgcgcgcggcgcgcgctga
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