Lysobacter yananisis: RDV84_14270
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Entry
RDV84_14270 CDS
T09342
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K23169
UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase [EC:
6.3.2.53
]
Organism
lya
Lysobacter yananisis
Pathway
lya00550
Peptidoglycan biosynthesis
lya01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RDV84_14270 (murD)
Enzymes [BR:
lya01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.53 UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase
RDV84_14270 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Motif
Other DBs
NCBI-ProteinID:
WMT01162
UniProt:
A0AA51XFY9
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All DBs
Position
3353972..3355375
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AA seq
467 aa
AA seq
DB search
MRISQLDGKRVALWGWGREGRAAYRAIRARLPSLALTLFCSVDEAADARGLHDPWLTIET
QASAERLGGFDWIVKSPGISPYRAEAVAAAEQGARFIGGTALWFGEHAAARDGGRTLCVT
GTKGKSTTTSLLAHLLRAGGHRTALAGNIGLPLLEALDPPQPPEFWAIELSSYQTGDVAL
GGARPDVAVALNLYPEHLDWHGSQARYVEDKLRLLTDARPRIAVLNATDPVLSALSLPDS
EIRWFGDATGWHLRGDALWRGEREVMDTASLPLPGRHNRGNLCAVLTAIEALGLDAEALA
PAAASFKPLPNRLQPIGERDGIGYVNDSISTTPHATLAALDCYSGKRIALLVGGHDRGID
WHGFAQAMRTRAPLAIVTMGENGPRIHALLAAVAGEGGFALSAARDLAEAMAQARAALGA
QGGVVLLSPGAPSFGPYRDYVARGRHFAELAGFDPDAISAIAGIGIA
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtatctcgcagcttgacggcaagcgcgtcgcgctgtggggctgggggcgcgaaggt
cgcgccgcctaccgcgcgatccgcgcgcgcctgccgtcgctggcgctgacgctgttctgt
tcggtcgatgaggccgccgacgcgcgcggcctgcacgacccgtggctgacgatagaaacc
caggccagcgccgagcgcctcggcgggttcgactggatcgtcaaatcgccgggcatcagc
ccgtatcgcgccgaagccgtggccgcggcggagcagggcgcgcgtttcatcggcggcacc
gcgctgtggttcggcgagcatgccgccgcgcgcgacggcggccgcacgctctgcgtcacc
ggcaccaagggcaagagcaccacgacctcgctgctggcgcacctgctgcgcgccggcggc
caccgcaccgcgctggccggcaacatcggcctgccgctgctggaagcgctggacccgccg
cagccgcccgagttctgggcgatcgaactgtcgagctaccagaccggcgacgtcgccctc
ggcggcgcgcgcccggacgtggcggtggcgctgaacctgtatcccgaacacctggactgg
cacggttcgcaggcgcgctacgtcgaggacaagctgcgcctgctgaccgacgcccggccg
cgcatcgccgtgctcaacgccaccgatccggtgctgtcggcgttgtcgctgcccgacagc
gagatccgctggttcggcgacgcgaccggttggcacctgcgcggcgacgcgctgtggcgc
ggcgagcgcgaagtcatggacaccgcctcgctgccgctgccgggccggcacaaccgcggc
aatctgtgcgcggtgctgaccgcgatcgaggcgctcggcctcgacgccgaagcgctggcg
ccggccgcggcgagcttcaagccgctgccgaaccgcctgcagcccatcggcgaacgcgac
ggcatcggctacgtcaacgattcgatcagcaccacgccgcacgcgaccttggcggcgttg
gactgctactcgggcaagcgcatcgcactgttggtcggcggccacgaccgcggcatcgac
tggcacggtttcgcgcaggcgatgcgcacgcgcgcgccgctggccatcgtcaccatgggc
gagaacggcccgcgcatccacgccttgctcgccgcggtggcgggcgagggcggtttcgcc
ttgagcgcggcgcgcgatctcgccgaggcgatggcccaggcccgcgccgcgctcggcgcg
caaggcggcgtggtgctgctgtcgccgggcgcgccgagcttcggcccgtatcgcgactac
gtcgcccgcggccgccatttcgccgaactggccgggttcgacccggacgccatcagcgcc
atcgcgggcatcggcatcgcttga
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