Lysobacter yananisis: RDV84_14875
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Entry
RDV84_14875 CDS
T09342
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
lya
Lysobacter yananisis
Pathway
lya03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RDV84_14875 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lya03400
]
RDV84_14875 (uvrB)
DNA repair and recombination proteins [BR:
lya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RDV84_14875 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RDV84_14875 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
WMT01277
UniProt:
A0ABY9P2S5
LinkDB
All DBs
Position
3562389..3564419
Genome browser
AA seq
676 aa
AA seq
DB search
MNDSSAPSGFRLVAPYQPAGDQPQAIERLTAGFDNGLAHQTLLGVTGSGKTYTIANVVER
VQKPTLVMAPNKTLAAQLYGEFKAFFPHNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSV
NEHIEQMRLSATKALLERRDALIVCTVSAIYGLGDPNEYFRMVLHMVRGERIDQRELIRR
LTEMQYTRNDTELRRATYRVRGEVIDVHPAESDAQALRIELFDGEIENLTIFDPLTGESL
EKVPRYTIYPGSHYVTTRRTVLDAIETIKAELRERLEYLYANNKLVEAQRLAQRTQFDLE
MLAEVGYCNGIENYSRHLSGHMPGEPPPCLFDYLPPDALLVVDESHVTVPQIGAMYKGDR
SRKETLVEFGFRMPSALDNRPLRFEEWEGRSPRSIFVSATPGPYELRKSEDQITELVVRP
TGLVDPQVEIRPVATQVDDVLGEIRERVAIGDRVLITTLTKRMAENLTEYLGEHGVKVRY
LHSDVDTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSAGSL
IQTIGRAARNLRGKAILYADRITNSMQKAIDETDRRRQKQVEYNEQHGIVPKSVAKAVVD
IMEGARVDPEALKARGKARRVAEEQAEYAALSPAQFAARIKQLEQQMYQHARDLEFEQAA
AVRDQLRQLKDAGFGA
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattccagcgctcccagcggtttccgactggtggctccgtaccagcccgccggc
gaccagccgcaggcgatcgaacggctgacggccggcttcgacaacggcctggcccaccag
accttgctcggcgtcaccggctcgggcaagacctacaccatcgccaacgtggtcgagcgg
gtgcagaagccgaccctggtgatggcgccgaacaagaccctggcggcgcagctgtacggc
gagttcaaggcgttcttcccgcacaacgcggtcgaatacttcgtcagctactacgactac
taccagcccgaggcctacgtcccgtccagcgacaccttcatcgagaaggacagctcggtc
aacgagcacatcgagcagatgcggctgtcggcgaccaaggccctgctcgagcgtcgcgat
gcgctgatcgtgtgcacggtctcggcgatctacggcctgggcgacccgaacgaatacttc
cgcatggtcctgcacatggtccgaggcgagcgcatcgaccagcgcgagctgatccgccgc
ctgaccgagatgcagtacacccgcaacgacaccgaactgcgccgcgccacctaccgcgtg
cgcggcgaggtcatcgacgtgcacccggccgaaagcgacgcccaggcgctgcggatcgag
ctgttcgacggcgagatcgagaacctgacgatcttcgatccgctgaccggcgaaagcctg
gagaaggtgccgcgctacacgatctatcccggctcgcactacgtcaccacgcgccgcacc
gtgctcgacgcgatcgagacgatcaaggccgagctgcgcgagcgcctggagtacctgtac
gccaacaacaagctggtcgaggcccagcgcctggcccagcgcacccagttcgacctggag
atgctggccgaggtcggctactgcaacggaatcgagaactactcgcgccacctcagcggg
cacatgcctggcgagccgccgccgtgcctgttcgactacctgccgcccgacgcgttgctg
gtggtcgacgagtcgcacgtgaccgttccgcagatcggcgcgatgtacaagggcgaccgc
tcgcgcaaggagaccctggtcgagttcggcttccgcatgccctcggcgctggacaaccgg
ccgctgcgcttcgaggagtgggaagggcgctcgccgcgctcgatcttcgtctcggccacg
ccgggcccgtacgagctgcgcaagtccgaggaccagatcaccgaactggtggtgcgcccg
accggcctggtcgacccgcaagtggagatccgtccggtcgcgacccaggtcgacgacgtg
ctcggcgagatccgcgagcgcgtcgccatcggcgaccgcgtgctgatcaccaccctgacc
aagcgcatggccgagaacctcaccgagtacctcggcgagcacggggtcaaggtgcgctac
ctgcactcggacgtggacacggtcgagcgcgtggagatcatccgcgacctgcgcctgggt
aagttcgacgtgctggtcggcatcaacctgctgcgcgagggcctggacatgcccgaggtg
tcgctggtggcgatcctcgacgccgacaaggaaggcttcctgcgctcggccggctcgctg
atccagaccatcggccgcgccgcgcgcaacctgcgcggcaaggcgatcctctacgccgac
cgcatcaccaactcgatgcagaaggcgatcgacgagaccgaccggcgccggcagaagcag
gtcgagtacaacgagcagcacggcatcgtgcccaagtcggtggccaaggcggtggtcgac
atcatggaaggcgcgcgggtcgatcccgaggcgctcaaggcgcgcggcaaggcgcggcgg
gtggcggaggagcaggccgagtacgcggcgctgtcgccggcccagttcgcggcccggatc
aagcagctcgagcagcagatgtaccagcacgcgcgcgacctggagttcgagcaggccgcg
gcggtgcgcgaccaactgcgccagctcaaggatgccggcttcggcgcctga
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integrated database retrieval system
