Lysobacter yananisis: RDV84_16525
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Entry
RDV84_16525 CDS
T09342
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
lya
Lysobacter yananisis
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lya02000
]
RDV84_16525
Transporters [BR:
lya02000
]
Other transporters
Pores ion channels [TC:
1
]
RDV84_16525
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_4
DUF6918
Motif
Other DBs
NCBI-ProteinID:
WMT01581
UniProt:
A0ABY9P3P2
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Position
3956041..3958563
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AA seq
840 aa
AA seq
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MIARSPGRKTLSFAVALSLAASAAAHAQQSAPAQEDEAKTLAGLTVTAQKREEAMQDVPI
SITALPEQLLQDTGVRDIKDVQLLVPGLTVSSTQSEVQTVARIRGIGTVGDNAGLESSVG
VVVDGVYRPRNGVGFGDLGEIERIEVLKGPQGTVFGKNTSAGVINVITRRPDYNTKVEGE
LTIGDYGAVGAAGSFNTALGENAAFRIYGAKRKRDGFTDVEVGRGPRAEREDGDQNFHTL
RGQLLFEPTENLDINLIADFSSREENCCVGLTTVRGPTAAIVNALAGGTGVAPVADPFAR
RAWSNRPTTQDIKDKGVSAEINWITPWFGGATLTSITAARDWQAINGLDFDFSTADMIYR
NADPDESFTGFKQFSQELRLTGSTDKLDWMVGLFYADEDLKRNDSYSLGAAYEPYLSTAV
LSQIAARFPAGVVNTANAATFLSQASGRPFGTAFTGLGALDRYKQNSTSVALFTNNTWHV
TDQLDLTLGLRYTKENKELDSVYSNPNGGVGCGAGLANPARVGQALAARGVPLAAINALV
PQVLGFMCLPWANTLHNGRVTHQERDEKEWSGTFKAAYRWNEHVMGYASAARGYKAGGFN
LDRVQSSNGLSAGTAGITPVNDTSFPGEFVDSYELGAKTTWAGGNLLLNATLFHQTYSDF
QLNSFLGTSFVVRSIPEVVSQGIDTEVLWQTGIKGLMLQGGVMYADTKYGNDPLPDADLA
KLPGARASFAPLWSASAAVTYQWDFGPDLVGRFNIGAKYSSDYNTGSDLDPEKGQEAYTV
VNARLGVGAKNRRWMVEAWAMNLFDEEYKQVGFDAPLQTGSWNAFLGAPRTYGVTLRVSY
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgatcgctcgctcgccgggtcgcaagaccttgtcgttcgccgtcgccctgagcctggcc
gcgtccgccgccgcgcacgcgcagcagtccgcgccggcgcaggaggacgaggccaagacc
ttggccggcctcaccgtcaccgcgcaaaaacgcgaggaggcgatgcaggacgtgccgatc
tcgatcaccgccttgcccgagcaactgctgcaggacaccggcgtgcgcgacatcaaggac
gtgcagttgctggtgcccggcctgaccgtcagcagcacccagagcgaggtgcagacggtg
gcgcgcatccgcggcatcggcacggtcggcgacaacgccggcctggaatcctcggtcggc
gtggtcgtcgacggcgtgtaccgcccgcgcaacggcgtgggcttcggcgacctcggcgag
atcgagcggatcgaagtgctcaagggcccgcagggcacggtgttcggcaagaacacctcg
gccggcgtcatcaacgtcatcacccgccgcccggactacaacaccaaggtcgagggcgag
ctgaccatcggcgactacggcgcggtcggcgcggccggttcgttcaacaccgcgctcggc
gaaaacgccgcgttccgcatctacggcgccaagcgcaagcgcgacggcttcaccgacgtc
gaagtcggccgcggcccgcgcgccgagcgcgaggacggcgaccagaacttccacaccctg
cgcggccaactgttgttcgagccgaccgagaacctcgacatcaacctgatcgccgacttc
agcagccgcgaggaaaactgctgcgtcggcctgaccacggtgcgcggcccgaccgcggcg
atcgtcaacgcgctggccggcggcaccggcgtggcgccggtggccgatccgttcgcgcgc
cgcgcctggagcaaccggccgaccacccaggacatcaaggacaagggcgtttcggccgag
atcaactggatcaccccgtggttcggcggcgccacgctgacctcgatcaccgccgcgcgc
gactggcaggcgatcaacggcctggacttcgatttctccaccgccgacatgatctaccgc
aacgccgatccggacgaatccttcaccggcttcaagcagttcagccaggaactgcgcctg
accggttccaccgacaagctcgactggatggtcggcctgttctatgccgacgaagacctc
aagcgcaacgattcctacagcctcggcgccgcctacgagccgtacctgtcgaccgcggtg
ctgagccagatcgccgcgcgcttcccggccggcgtggtcaacaccgccaacgccgcgacc
ttcctgtcgcaggcgtccgggcgtccgttcggcaccgccttcaccggcctcggcgcgctc
gaccgctacaagcagaacagcaccagcgtggcgttgttcaccaacaacacctggcacgtc
accgaccagctcgacctgaccctgggcctgcgctacaccaaggagaacaaggagctcgac
tcggtctacagcaaccccaacggcggcgtcggctgcggcgctggcctggccaatccggcg
cgggtggggcaggcgctggccgcgcgcggcgtgccgctggcggcgatcaacgcgctggtg
ccgcaggtgctcggcttcatgtgcctgccgtgggccaacaccctgcacaacggccgggtg
acccaccaggagcgcgacgagaaggaatggtcgggcacgttcaaggccgcgtaccgctgg
aacgagcacgtcatgggctacgcctcggccgcgcgcggctacaaggccggcggcttcaac
ctcgaccgggtgcagtcctccaacgggctgtcggccggcaccgccggcatcaccccggtc
aacgacacctcgttcccgggcgagttcgtcgacagctacgagctcggcgccaagaccacc
tgggccggcggcaacctgctgctcaacgcgaccttgttccaccagacctacagcgacttc
cagctcaacagcttcctcggcacgagcttcgtggtgcgctcgattccggaagtggtgtcg
cagggcatcgacaccgaagtgctgtggcagaccgggatcaagggcctgatgctgcagggc
ggggtgatgtacgccgacaccaagtacggcaacgatcccttgcccgacgccgacctggcc
aagctgcccggcgcgcgcgccagcttcgccccgttgtggtcggcctcggccgcggtgacc
taccaatgggacttcggccccgacctggtcggccgcttcaacatcggcgccaagtattcc
tccgactacaacaccggctccgacctcgacccggaaaagggccaggaggcctacaccgtg
gtcaacgcgcgcctgggcgtcggcgccaagaaccgccgctggatggtcgaggcctgggcg
atgaacctgttcgacgaggaatacaagcaggtcggcttcgacgccccgttgcagaccggt
tcgtggaacgccttcctcggcgcgccgcgtacctacggggtgaccttgcgggtgagctac
tga
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