Lysobacter yananisis: RDV84_17250
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Entry
RDV84_17250 CDS
T09342
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
lya
Lysobacter yananisis
Pathway
lya00020
Citrate cycle (TCA cycle)
lya00190
Oxidative phosphorylation
lya00650
Butanoate metabolism
lya00720
Other carbon fixation pathways
lya01100
Metabolic pathways
lya01110
Biosynthesis of secondary metabolites
lya01120
Microbial metabolism in diverse environments
lya01200
Carbon metabolism
Module
lya_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lya_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lya_M00149
Succinate dehydrogenase, prokaryotes
lya_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RDV84_17250 (sdhA)
00650 Butanoate metabolism
RDV84_17250 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
RDV84_17250 (sdhA)
00720 Other carbon fixation pathways
RDV84_17250 (sdhA)
Enzymes [BR:
lya01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RDV84_17250 (sdhA)
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GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
GIDA
DAO
Thi4
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
WMT05869
UniProt:
A0ABY9PG12
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All DBs
Position
4120847..4122601
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AA seq
584 aa
AA seq
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MVVVGAGGAGLRATFGLAQKGLKTACITKVFPTRSHTVAAQGGVAAALANMGDDNWKYHF
YDTVKGSDWLGDQDAIEYMCREAIPAIIELEHYGVPFSRTDDGKIYQRPFGGMTTKFGKG
PPAQRTCAAADRTGHAILHTLYQQSLAHDAQFFIEYFALDLIMDEHGACRGVLALDMAEG
TLHLFKAQGTVLATGGYGRAYFSATSAHTCTGDGGGMALRAGLGMQDMEFVQFHPTGIYG
AGCLITEGVRGEGGILRNSSGERFMERYAPSVKDLAPRDMVSRAMTMEIRDGRGVGEHKD
HILLDLTHLGPEVIHKKLPGIAESARIFAGVDVEKQPIPVIPTVHYNMGGIPTNYHGEVV
QLRDGNPDAVVPGLYAIGEAACVSVHGANRLGSNSLLDLVVFGRAVANRCAETITPDAKQ
APLAADACDIALARLDKLRNASGSTPTSVIRDKMQRTMQADAAVFRTSQTLAEGVAKMRD
IHASFADVKVTDRSMVWNSDLIETFELANLLDQALVTIVSAENRKESRGAHAHEDFPERD
DAHWQKHTLCWVDEKGNTRIDYRPVHMQPMTGDVESIPPAKRVY
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtggtcggcgccggcggcgccggcctgcgcgccaccttcggcctggcccagaag
ggcctgaagaccgcctgcatcaccaaggtgttcccgacccgttcgcacaccgtggcggcg
cagggcggcgtggccgcggcgctggccaacatgggcgacgacaactggaagtaccacttc
tacgacaccgtcaagggctcggactggctcggcgaccaggacgccatcgagtacatgtgc
cgcgaggcgattccggccatcatcgagctggaacactacggcgtgccgttctcgcgcacc
gacgacggcaagatctaccagcgtccgttcggcggcatgaccaccaagttcggcaagggc
ccgccggcgcagcgcacctgcgccgccgccgaccgcaccggccacgcgatcctgcacacc
ctgtaccagcagtcgctggcgcacgacgcgcagttcttcatcgaatacttcgccctcgac
ctgatcatggacgagcacggcgcctgccgcggcgtgctcgcgctggacatggccgaaggc
accctgcacctgttcaaggcgcaaggcacggtgctggcgaccggtggctacggccgcgcc
tacttcagcgccacctcggcccacacctgcaccggcgacggcggcggcatggccttgcgc
gccggcctgggcatgcaggacatggagttcgtgcagttccacccgaccggcatctacggc
gccggctgcctcatcaccgagggcgtgcgcggcgaaggcggcatcctgcgcaacagcagc
ggcgagcgcttcatggagcgctacgcgccgagcgtgaaggacctcgccccgcgcgacatg
gtcagccgcgcgatgaccatggaaatccgcgacgggcgcggcgtcggcgagcacaaggac
catatcctgctcgacctgacccacctcggcccggaagtgatccacaagaagctgccgggc
atcgccgaatcggcgcgcatcttcgccggcgtcgacgtcgagaagcagccgatcccggtg
atcccgaccgtgcactacaacatgggcggcattccgaccaactaccacggcgaagtggtg
cagctgcgcgacggcaaccccgacgcggtcgtgccgggcctgtacgcgatcggcgaagcc
gcctgcgtgtcggtgcacggcgccaaccggctgggttccaactcgctgctcgacctggtg
gtgttcggccgcgcggtcgccaaccgctgcgcggaaaccatcaccccggacgccaagcag
gcgccgctcgccgccgacgcctgcgacatcgccctggcgcgcctggacaagctgcgcaac
gccagcggcagcaccccgacctcggtcatccgcgacaagatgcagcgcaccatgcaggcc
gatgcggcggtgttccgcaccagccagaccctggccgagggcgtggccaagatgcgcgac
atccacgcgtcgttcgccgacgtcaaggtcaccgaccgctcgatggtgtggaactcggac
ctgatcgaaaccttcgagctggccaacctgctcgaccaggccctggtgaccatcgtctcg
gccgagaaccgcaaggaatcgcgcggcgcgcatgcgcacgaggacttccccgagcgcgac
gacgcgcactggcagaagcacacgctgtgctgggtggacgagaagggcaatacccgcatc
gactatcgccccgtccacatgcagccgatgacgggggatgtcgaatcgatcccgccggcc
aagcgcgtctactga
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