Lysobacter yananisis: RDV84_17805
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Entry
RDV84_17805 CDS
T09342
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
lya
Lysobacter yananisis
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lya03032
]
RDV84_17805
03036 Chromosome and associated proteins [BR:
lya03036
]
RDV84_17805
03400 DNA repair and recombination proteins [BR:
lya03400
]
RDV84_17805
DNA replication proteins [BR:
lya03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RDV84_17805
Chromosome and associated proteins [BR:
lya03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
RDV84_17805
DNA repair and recombination proteins [BR:
lya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
RDV84_17805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
WMT01813
UniProt:
A0ABY9P610
LinkDB
All DBs
Position
4250199..4250501
Genome browser
AA seq
100 aa
AA seq
DB search
MTKSELIEILSQRQAHLKGDDVDLAVKALLEMMGGALSAGERIEIRGFGSFSLHYRPPRL
GRNPKTGESVALPGKHVPHFKPGKELRERVSGVTPLDEEG
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtccgagctcatcgagatcctttcccaacgtcaggcccacctcaagggcgac
gacgtggatctggcggtgaaagccttgttggaaatgatgggcggggccctgtcggcgggc
gagcggatcgagatccgcggcttcggcagcttctccctgcactaccgtccgccgcgcctg
ggccgcaatcccaagaccggcgaatcggtcgcgctgcccggcaagcacgtgccacacttc
aagcccggcaaggaattgcgcgagcgcgtcagcggcgtgaccccgctggacgaagaaggc
tga
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