Lysobacter yananisis: RDV84_17870
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Entry
RDV84_17870 CDS
T09342
Symbol
ndk
Name
(GenBank) nucleoside-diphosphate kinase
KO
K00940
nucleoside-diphosphate kinase [EC:
2.7.4.6
]
Organism
lya
Lysobacter yananisis
Pathway
lya00230
Purine metabolism
lya00240
Pyrimidine metabolism
lya01100
Metabolic pathways
lya01110
Biosynthesis of secondary metabolites
lya01232
Nucleotide metabolism
lya01240
Biosynthesis of cofactors
Module
lya_M00049
Adenine ribonucleotide biosynthesis, IMP => ADP,ATP
lya_M00050
Guanine ribonucleotide biosynthesis, IMP => GDP,GTP
lya_M00052
Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP
lya_M00053
Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
lya_M00938
Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
RDV84_17870 (ndk)
00240 Pyrimidine metabolism
RDV84_17870 (ndk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lya04131
]
RDV84_17870 (ndk)
Enzymes [BR:
lya01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.6 nucleoside-diphosphate kinase
RDV84_17870 (ndk)
Membrane trafficking [BR:
lya04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
RDV84_17870 (ndk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NDK
Motif
Other DBs
NCBI-ProteinID:
WMT01826
LinkDB
All DBs
Position
4264116..4264541
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AA seq
141 aa
AA seq
DB search
MALERTLSIIKPDAVAKNVIGEIYTRFEKAGLKVVASKMKHLSKQEAEGFYAVHRERPFF
AALVEFMISGPVVIQALQGENAVLKHRELMGATNPKDAAPGTIRADFADSIDANAVHGSD
SLENAAIEIAYFFPATDVYAR
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggagcgcaccctgtccatcatcaagcccgacgccgtcgccaagaacgtcatc
ggcgagatctacacccgcttcgaaaaggccggcctcaaggtcgtcgcctcgaagatgaag
cacctgtcgaagcaggaagcggaaggtttctacgccgttcaccgcgaacgtccgttcttc
gccgcgctggtcgagttcatgatcagcggtccggtggtgatccaggcgttgcagggcgag
aacgccgtgctcaagcaccgcgaactgatgggcgccaccaacccgaaggacgccgcgccg
ggcacgatccgcgccgacttcgccgacagcatcgacgccaacgccgtgcacggttcggac
agcctggagaacgccgcgatcgaaatcgcgtacttcttcccggccaccgacgtctacgcg
cgctga
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