Lysobacter yananisis: RDV84_18010
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Entry
RDV84_18010 CDS
T09342
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
lya
Lysobacter yananisis
Pathway
lya03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RDV84_18010 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lya03019
]
RDV84_18010 (orn)
03009 Ribosome biogenesis [BR:
lya03009
]
RDV84_18010 (orn)
Messenger RNA biogenesis [BR:
lya03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RDV84_18010 (orn)
Ribosome biogenesis [BR:
lya03009
]
Eukaryotic type
Pre-60S particles
RNases
RDV84_18010 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WMT01852
UniProt:
A0ABY9P489
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All DBs
Position
4294865..4295446
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AA seq
193 aa
AA seq
DB search
MSGHPGHEHGHEHRLIWIDLEMTGLDTDRDSILEIATVVTDAQLNVLAEGPELAIAHPLQ
RLEAMDEWNRNQHGKSGLWQRVLEQGVTMEEAERRTLAFLADWVAPNTSPICGNSICQDR
RFLHRCMPKLEKYFHYRNLDVSTVKELARRWAPEVLAGMHKDSKHTALSDVHDSIAELRH
YRGFMGKLGGLAG
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgagcggacaccccggacacgagcacggacacgaacaccggttgatctggatcgacctg
gaaatgaccgggctggacaccgaccgcgactcgatcctggagatcgccaccgtcgtcacc
gacgcccagctcaacgtgctcgccgaaggcccggaactggccatcgcccatccgttgcag
cggctggaggcgatggacgagtggaaccgcaaccagcacggcaagtccggcttgtggcag
cgcgtgctggagcagggcgtgacgatggaagaggccgagcgccggaccctggcgtttctc
gccgactgggtcgcgccgaacacttcgccgatctgcggcaactcgatctgccaggaccgc
cgcttcctgcaccgctgcatgccgaagctggagaagtacttccattaccggaacctcgac
gtcagcacggtcaaggaactggcgcggcgctgggcgccggaggtgctcgcggggatgcac
aaggacagcaagcacaccgcgctgagcgacgtgcacgactcgatcgccgagctgcggcat
taccgcgggttcatgggcaagctcggcgggctcgcgggctga
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