KEGG   Lysobacter yananisis: RDV84_18345
Entry
RDV84_18345       CDS       T09342                                 
Name
(GenBank) VirB4 family type IV secretion/conjugal transfer ATPase
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
lya  Lysobacter yananisis
Pathway
lya03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lya00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RDV84_18345
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lya02044]
    RDV84_18345
Enzymes [BR:lya01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     RDV84_18345
Secretion system [BR:lya02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   RDV84_18345
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_22 Septin NPHP3_N AAA_7 RsgA_GTPase AAA_16 TraC_F_IV TrwB_AAD_bind ABC_tran AAA_29 MMR_HSR1
Other DBs
NCBI-ProteinID: WMT01908
UniProt: A0ABY9P4D3
LinkDB
Position
4354600..4357053
AA seq 817 aa
MFTPDTPISEFIPLSTHVAPTVIKTTGGDFMLVWRLGGLPFVGREEWELEHRHNTFNRLL
QTLRAPDFTNVAFWVHDVRRRRRISTENKFDQLFNQNMSDGYYASLSAQKLMQNELYLTM
LYRPIVGSKRFVEKSTSVQMLQEQQDQSVAKMLELAGNVEAVIKDYAPYRLGMYEAKNGV
VFSEALEFFGYLLNRLDEPVPVLNAPVYNYLPVSRLTLSAKTGDFVITTPTGVNNFGAIL
NVKEYAEGTYPGILNGLKYLDFEYVITHSFSPMGRQDALKVLDRTKGMMVSSGDKAVSQI
VELDYAMDQLASGNFVLGEYHFTFAIYAESQEKLAAQVAAARAELSNAGFVSAKEDMAIA
ASFYSQFPANWKFRTRIANVSSLNFLGLSPLHNFATGKQHNNPWGDSVTTLQTTNGQPYY
FNFHATHPAENSLGEKAIANTMVIGKSGTGKTALINFLLSQVQKLKPTPTIFFFDKDRGA
EIFVRACGGNYLALDNGQPTGFNPFQCENNETNVQFLADLIKVLANKSQYSAREDEDIFR
AVENILDTPMHLRSMTNFQKSLPNMGDDGLYARLRKWTAGNSLGWVFDNPVDTINLEKAN
IIGFDYTDVIDNVEVRVPVINYLLHRLEQLIDGRPLIYVMDEFWKILDGGGALKDFAKNK
QKTIRKQNGLGIFATQSPEDALASDISASLIEQTATLILLPNPNASREDYMEGLKLTDAE
YEVVKNLDERSRCFLVKQGHAATVCQLNLRGMDDALAVISASTDNIEIMHRVLQNAADKA
GVSPDDLTPEQWLADFYANRKGSGKGKAVAEERKARA
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgttcacgcccgatactcccatcagcgaattcattccgctgtccacgcacgtggcgccc
accgtgatcaagaccacgggaggcgacttcatgttggtctggcgcctgggcggcttgccg
ttcgtgggacgcgaggagtgggagctcgagcaccgccacaacaccttcaaccggctgctg
cagaccctgcgcgcgccggacttcaccaacgtggcgttctgggtgcacgacgtgcgccgc
cgccgccgcatcagcaccgagaacaagttcgaccagctgttcaaccagaacatgtccgac
ggctactacgcctcgctgtcggcgcagaagctgatgcagaacgagctgtacctgaccatg
ctgtaccggccgatcgtcggcagcaaacgcttcgtcgagaagtcgaccagcgtgcagatg
ctgcaggaacagcaggatcagtcggtggccaagatgctggagctggccggcaacgtcgag
gcggtgatcaaggactacgcgccgtaccgcctgggcatgtacgaggccaagaacggcgtc
gtgttctccgaggcgctggaattcttcggctacctgctcaaccgcctggacgagccggtg
ccggtgctcaacgcgccggtctacaactacctgccggtgagccgcctgaccctgtcggcc
aagaccggcgacttcgtcatcaccacgccgaccggcgtcaacaacttcggcgcgatcctc
aacgtcaaggagtatgccgagggcacgtaccccggcatcctcaacggcttgaagtacctc
gacttcgagtacgtcatcacccattccttcagcccgatggggcgccaggacgcgctcaag
gtgctcgaccgcaccaagggcatgatggtgtcctccggcgacaaggcggtcagccagatc
gtcgagctcgactacgcgatggaccagctcgcctcgggcaacttcgtgctcggcgagtat
cacttcaccttcgccatctacgccgaaagccaggaaaagctggcggcccaggtcgccgcc
gcgcgcgccgagctgtccaacgccggcttcgtctcggccaaggaggacatggcgatcgcc
gcgtccttctattcgcagttcccggccaactggaagttccgcacgcgcatagccaacgtc
agctcgctgaacttcctcggcctgtcgccgctgcacaacttcgccaccggcaagcagcac
aacaacccgtggggcgacagcgtgaccacgctgcagaccaccaacggccagccgtactac
ttcaacttccacgccacccatccggccgagaattcgctgggcgagaaggcgatcgccaac
acgatggtgatcggcaagtccggtaccggcaagaccgcgctgatcaacttcctgctcagc
caggtgcagaagctcaagccgacgccgacgatcttcttcttcgacaaggaccgtggcgcc
gagatcttcgtgcgcgcctgcggcggcaactacctagcgctggacaacggccagccgacc
ggcttcaacccgttccagtgcgagaacaacgagaccaacgtccagttcctcgccgacctg
atcaaggtgctggccaacaagtcgcagtattcggcgcgcgaggacgaggacatcttccgc
gcggtcgagaacatcctcgacacgccgatgcacctgcgcagcatgaccaacttccagaag
agcctgcccaacatgggcgacgacggcctgtatgcgcgcctgcgcaagtggaccgccggc
aactcgctggggtgggtgttcgacaacccggtggacacgatcaacctggagaaggcgaac
atcatcggcttcgactacaccgatgtcatcgataacgtcgaggtccgggtcccggtcatc
aactatttgctgcaccgtctggagcaattgatcgacggacgcccgctaatctacgtcatg
gacgagttctggaagatcctcgacggcggcggcgccctcaaggatttcgccaagaacaag
cagaagaccatccgtaagcagaacggcctgggcattttcgccacgcagagcccggaagat
gcgctggccagcgacatctccgcctcgctgatcgaacagaccgcgacgctgatcctgctg
ccgaacccgaacgccagccgcgaggactacatggaaggcctcaagctgaccgacgcggag
tacgaagtggtgaagaacctggacgagcgttcgcgctgcttcctggtcaagcagggccat
gcggcgaccgtgtgccagctcaacctgcgcggcatggacgacgccctggcggtcatctcg
gcgtcgaccgacaacatcgaaatcatgcaccgcgtcctgcagaacgccgccgacaaggcc
ggcgtcagcccggacgacctgacccccgagcagtggctggccgacttctacgccaaccgc
aagggctcgggcaagggcaaggcggtggccgaggagcggaaggccagggcctga

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