Lysobacter yananisis: RDV84_18700
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Entry
RDV84_18700 CDS
T09342
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
lya
Lysobacter yananisis
Pathway
lya00550
Peptidoglycan biosynthesis
lya01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RDV84_18700 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lya01003
]
RDV84_18700 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lya01011
]
RDV84_18700 (pbpC)
Enzymes [BR:
lya01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
RDV84_18700 (pbpC)
Glycosyltransferases [BR:
lya01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
RDV84_18700 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
lya01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
RDV84_18700 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
WMT01974
UniProt:
A0AA51SDS9
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All DBs
Position
4462414..4464813
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AA seq
799 aa
AA seq
DB search
MPFFSAAAANAKPRRSRLRRAALWATLALACLAIATMLLDLAFPLPLPRARDAGAVVVAR
DGTPLRAFADRDGVWRYPVGAAQVSPLYLQALLNYEDRWFFRHPGINPAAMARAAAQWLR
SGRVVSGGSTLTMQVARILDAEPGEPRRSLWAKSRQMLRALQLEAHLSKPQILALYLNRA
PFGGTVEGVEAASWAYLGKPSSRLSHAEAALLTVLPQSPSRLRPDREPERARVARDKVLA
RMARLGVWTRAQVADARVEPVVARSLQPPRFAPLLAQRLRFANPRAARVVSTIDPQLQRT
LEDRVAAYFSGLPERTSAALLVIDNASLEARAYVGSVTFGDAARLGHVDMVQAWRSPGST
LKPFLYGLAMDDGLIHSESLFVDAPQSFGGYRPGNFDTAFNGPVGAASALRLSLNIPAVD
LLDRVGPARFSARLAHAGIDLQWPRGAQPNLAMILGGTGARLEDLVGAYAAFNRGGIAGR
VRYQLGAAKTERRLLSPGAAWIVREILEANPRPGSVEQTFDAGGRPRVAWKTGTSYGFRD
AWALGSTRRYTVGVWVGRPDGTPLPGQYGAVTALPLLFETIDSLPRLRGDAVPLPPPASV
RQVEICWPLGLPPDPAQPQLCQRRREAWTLDGSVPPTFAERDARLWSAGVERFEVDARSG
LRLSAECAREHAREERALARWPALASPWLPADTRKASRLPPLSPDCSADGRDAAEELRIE
GIDDLAMLARAPGSATPLRLSVRALGSDARVRWLLDGRWIGETDGRGRFDYDFGEPGEHT
LTALADTGAWSRVRFKVLR
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgccgttcttctccgctgccgccgccaacgccaagccgcgccgcagccgcctgcgccgc
gccgcgctgtgggcgaccctggccctggcctgcctggcgatcgcgacgatgctgctcgat
ctggccttcccgctgccgctgccgcgcgcgcgcgacgccggcgcggtggtggtcgcgcgc
gacggcacgccgctgcgcgcgttcgccgaccgcgacggggtgtggcggtatccggtcggc
gccgcgcaggtttcgccgctgtacctgcaagcgctgctcaactacgaagaccgctggttc
ttccgccatccgggcatcaatcccgcggcgatggcgcgcgccgccgcgcagtggctgcgc
agcgggcgggtggtgtccggcggttcgaccctgaccatgcaggtcgcgcgcatcctcgac
gccgaacccggcgagccgcgccgcagcctgtgggccaagagccggcagatgctgcgcgcg
ctgcaactcgaggcgcatctgtccaagccgcagatcctcgcgctgtacctcaaccgcgcg
ccgttcggcggcaccgtggaaggggtggaagcggcgagctgggcgtacctgggcaagccg
tcctcgcgcctgtcgcacgccgaggccgcgctgctgacggtgttgccgcaatcgccgagc
cggctgcgtccggaccgcgagcccgagcgcgcgcgcgtggcccgcgacaaggtgctcgcg
cgcatggcgcgactgggcgtgtggacgcgcgcccaggtcgccgacgcccgggtcgagccg
gtggtggcgcgctcgctgcagccgccgcggttcgcgccgctgctggcgcaacgcctgcgc
ttcgccaatccgcgcgcggcgcgggtggtctcgaccatcgacccgcagttgcagcgcacc
ttggaagaccgcgtcgccgcgtatttttccggcttgcccgaacgcacgtcggcggcgctg
ctggtgatcgacaacgccagcctggaagcgcgcgcctacgtcggctcggtgaccttcggc
gacgccgcgcggctcggccacgtcgatatggtccaggcttggcgctcgccgggctccacg
ctcaagccgttcctgtacgggctggcgatggacgacgggctgatccattcggaaagcctg
ttcgtcgatgcgccgcaatccttcggcggctatcgcccgggcaacttcgacaccgccttc
aacgggccggtgggcgcggccagcgcgttgcggctgtcgctgaacattcccgcggtggac
ctgctcgaccgggtcggcccggcgcgtttctccgcgcgcctggcccacgccggcatcgac
ctgcaatggccgcgcggcgcgcagccgaacctggcgatgatcctcggcggcaccggcgcg
cgcctggaggatctggtcggcgcctatgccgcgttcaatcgcggcggcatcgccggacgc
gtgcgctatcaactcggcgcggcgaagaccgaacgccggctgctgtcgccgggcgcggcc
tggatcgtgcgcgaaatcctcgaagccaatccgcgccccggcagcgtcgagcagaccttc
gacgccggcggccgcccgcgcgtggcctggaagaccggcaccagctacggcttccgcgac
gcctgggcgctgggcagcacgcgccgctataccgtcggggtctgggtcggccggcccgac
ggcacgccgctgccgggccagtacggcgcggtgaccgcgctgccgctgctgttcgagacc
atcgacagcctgccgcgcctgcgcggcgacgcggtgccgctgccgccgcccgcgagcgtg
cgccaggtcgaaatctgctggccgctgggcctgccgccggacccggcgcagccgcagctg
tgccagcgccggcgcgaggcctggacgctcgacggctcggtgccgccgaccttcgccgag
cgcgatgcgcggctgtggagcgcgggcgtggagcggttcgaagtggacgcgcgcagcggc
ctgcggctgtcggccgagtgcgcgcgcgagcacgcgcgcgaggagcgcgcgctggcgcgc
tggccggcgctggcttcgccgtggctgccggcggacacccgcaaggcgtcgcggctgccg
ccgttgtcgccggattgcagcgccgacggccgcgacgccgccgaggaactgcgcatcgaa
ggcatcgacgatctcgccatgctcgcgcgcgctcccggcagcgcgacgccgttgcggctg
tcggtacgcgcgctcggcagcgacgcgcgggtgcgctggctgctcgacggacgctggatc
ggcgagaccgacgggcgcggccggttcgactacgacttcggcgagccgggcgaacacacg
ctgacggcgctggccgataccggcgcgtggtcgcgggtgcggttcaaggtgctgcgctga
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