KEGG   Lysobacter yananisis: RDV84_19455
Entry
RDV84_19455       CDS       T09342                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
lya  Lysobacter yananisis
Pathway
lya03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lya00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RDV84_19455 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lya02044]
    RDV84_19455 (tssM)
Secretion system [BR:lya02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   RDV84_19455 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C AAA_16 Phage_holin_9 DUF4034 AAA_29 IcmF_helical
Other DBs
NCBI-ProteinID: WMT02120
UniProt: A0ABY9P510
LinkDB
Position
complement(4637755..4641258)
AA seq 1167 aa
MMSYLYRFIDFMRRKGLTDLAAFALTVILVWTGGPYFGTDSWYPLRSVQARLILIGAIGA
GWLLWRGWRWWRERRAAGEMAQDLAAPAGEGADSPAARAGQEQARLRARFAEAMELLRKR
KRRDGRGLDTLPWYLLIGAPGAGKSTLLQNSGLDFPLKEHFGGHTVAGVGGTRQCDWWFA
DQAVFIDSAGRYTTQDSDAAADGAAWQAFLGLLRKHRRRPLNGVIVAVSASDLLDPDEDR
RRAHARAVRRRLDELGERLRATVPVYLVLTKCDLISGFGDFFAELDGAGREQVWGTTFPH
GRDAPADPTTLFAAELELLLGRIDARALDRLQAFRDPQRRAGVLSFPQQLRLLQPQLQAF
VHSAFGSHGYADQPWLRGVYFTSGTQHGHPIDRVLSTVARVFGLAPSRLPAPADKPRTFF
VGRLLNEVMFAEAGLAGGYLGSERRKRALQVAAWVGLGAATLTLLFCLIGSYTNNRQRIG
QVRDALADYPMEALPDATTEQEFYARALQRFDVLERTRNVAEPPGRPVPWSYRFGLYRGA
SLGADVQAAYLRDLNAVMLPALAQSLHLSLSGSSGDPQWLYQLLKGYLMLGQPARRDVGH
LSALAATHWRRTLSDDPALRAALDRHLRALFAGGARALPLDERQIERARETLHTAEIPTL
VYGGLVLARSGATPREAAPVRLDRKLGLLGEVFQRRSGTALSEPLPALYTRQAFAELSGG
GIERAVREFLAEDWVLGGAKLDALARLQLTQQVLALYQRDYIAAWDRVLADIELRPVVGM
GEASAVAAKLGGPGSPLKALLELVREHTHGLHAAKPAGDKGAKGGGSAQNRSAAEADNDN
DNEGGAGQGGDAAGEPIGLHFEPFNRLLSSDGGAMPLDQTMTTLTQMSRSLLSIGAGVGG
VDQNDPALLIAAQQAEQLPAPASQWVAALAGRSRSLAADSAGESMRAGLRQSVGADCGLF
VNGRYPFDPGASSEIPLRDFAELFAGGGRFDRFFQQSLAAKVDTGARRWQWKDGMREVEA
GDVLARAQLADQIRQAYFGSGGLPQVAFTVSVAPQPGIGRVQLEVDGQSLDYADGVATRQ
SMTWPGPRAGFVKISAWDEQDQPLASKEYRGAWSWFRALQDGRLRREGDLNYVADIALGS
AQLRIGVLPGSLRHPFADASVQRFRCP
NT seq 3504 nt   +upstreamnt  +downstreamnt
atgatgtcgtatctctaccgcttcatcgatttcatgcgccgcaagggtttgaccgacctg
gccgcgttcgcgctgacggtgatcctggtctggaccggcgggccgtacttcggcaccgac
tcgtggtatcccctgcgcagcgtgcaggcgcggctgatcctgatcggcgcgatcggcgcc
ggctggctgctgtggcgcggctggcgctggtggcgcgaacgccgcgccgccggcgagatg
gcccaggacctcgccgcgccggccggcgagggcgccgacagccccgccgcgcgcgccggc
caggaacaggcgcggttgcgcgcgcgcttcgccgaggcgatggaactgctgcgcaagcgc
aagcgccgcgacggccgcggcctggacacgctgccgtggtacctgctgatcggcgcgccc
ggcgccggcaagagcacgctgctgcagaactcgggcctggactttccgctcaaggagcat
ttcggcggccacaccgtcgccggcgtcggcggcacccgccagtgcgactggtggttcgcc
gaccaggcggtgttcatcgacagcgccggccgctacaccacccaggattccgacgcggcc
gccgacggcgccgcttggcaggccttcctgggcctgctgcgcaagcaccggcgtcgtcca
ttgaacggggtgatcgtcgcggtcagcgcctcggacctgctcgatcccgacgaagaccgc
cgccgcgcccacgcgcgcgcggtgcgccggcgcctggacgaactcggcgagcgcctgcgc
gcgaccgtgccggtctacctggtgctgaccaagtgcgacctgatctccggcttcggcgat
ttcttcgccgagctcgacggcgccgggcgcgaacaggtctggggcacgaccttcccgcac
ggccgcgacgcgccggccgacccgaccacgctgttcgccgccgaactggaactgctgctg
ggccgcatcgacgcgcgcgcgctcgaccgcctgcaggcgttccgcgatccgcagcggcgc
gccggggtgctgtcgttcccgcagcagttgcgcctgctgcagccgcagttgcaggcgttc
gtgcacagcgcgttcggctcgcacggttatgccgaccagccgtggctgcgcggcgtctac
ttcacctccggcacccagcacggccatccgatcgaccgggtgctgtcgacggtggcgcgg
gtgttcggcctggcgccgtcgcggttgccggcgccggcggacaagccgcgcaccttcttc
gtcggccgcctgctcaacgaagtgatgttcgccgaggccgggctggccggcggctatctc
ggcagcgagcggcgcaagcgcgcgctgcaggtggccgcgtgggtcggtctcggcgcggcc
acgctgaccttgctgttctgcctgatcggcagttacaccaacaaccgccagcgcatcggc
caggtccgcgacgcgctggccgattacccgatggaagcgctgcccgacgcgaccaccgag
caggagttctacgcccgcgcgctgcagcgcttcgacgtgctcgaacgcacccgcaacgtc
gccgagccgcccggccggccggtgccgtggtcgtaccggttcggcctataccgcggcgcc
agcctcggcgctgacgtgcaggcggcatacctgcgcgatctcaacgcggtgatgctgccg
gcgctggcgcagtcgctgcacctcagcctgagtggttccagcggcgatccgcagtggctg
taccagttgctcaagggctatctgatgctgggccagccggcgcgccgcgacgtcggccat
ctctcggcgctggcggcgacgcactggcggcgcacgctgtcggacgatccggcgctgcgc
gcggcgctggaccggcacctgcgcgccttgttcgccggcggcgcgcgcgccttgccgctg
gacgagcgccagatcgaacgcgcgcgcgaaaccctgcacaccgccgagatcccgaccttg
gtctacggtggtctggtgctggcgcgctccggcgcgacgccgcgcgaagcggcgccggtg
cggctggaccgcaagctcggcctgctcggcgaagtgttccagcgccgcagcggcaccgcg
ctgtcggaaccgctgccggcgctgtacacccgccaggccttcgccgaactgtccggcggc
ggcatcgagcgcgcggtgcgcgagttcctggccgaggactgggtgctcggcggcgccaag
ctcgacgcgctggcgcggctgcaactgacccagcaagtgctggcgctgtaccagcgcgac
tacatcgccgcctgggaccgggtgctggccgacatcgagctgcggccggtggtcggcatg
ggcgaggccagcgcggtcgcggccaagctcggcggtccgggctcgccgttgaaagccttg
ctggagctggtgcgcgagcacacccatggcctgcatgcggccaagcccgcgggcgacaag
ggcgcgaaaggcggcggctccgcgcagaaccgctccgccgccgaggccgacaacgacaac
gacaacgagggcggcgcagggcagggcggcgacgctgccggcgagcccatcggcctgcat
ttcgaaccgttcaaccggctgctgtcgagcgacggcggggcgatgccgctggaccagacc
atgaccacgctgacccagatgagccgttcgctgctgagcatcggcgccggcgtcggcggc
gtcgaccagaacgacccggcgttgctgatcgccgcgcagcaggccgagcaactgcccgcg
ccggcctcgcaatgggtcgccgcgctggccggacgcagccgcagcctggccgccgacagc
gccggcgaatccatgcgcgccgggctgcgccagagcgtcggcgcggactgcggcctgttc
gtcaacggccgctatccgttcgacccgggcgccagcagcgagattccgctgcgcgacttc
gccgaactgttcgccggcggcggccgtttcgaccgtttcttccaacagtcgctggcggcc
aaggtcgacaccggcgcgcgccgttggcaatggaaggacggcatgcgcgaggtcgaggcc
ggggacgtgctcgcgcgcgcgcaactggccgaccagatccgccaggcttacttcggcagc
ggcggcctgccgcaagtggcgttcaccgtctcggtcgcgccgcagcccggcatcggccgg
gtgcagctggaggtcgacggccaaagcctggactacgccgacggcgtcgccacgcgccag
agcatgacctggcccggcccgcgcgccggcttcgtcaagatcagcgcctgggacgagcag
gaccagccgctggcgagcaaggaataccgcggcgcgtggtcgtggttccgcgccctgcag
gacggtcgcctgcgccgcgaaggcgacctgaactacgtcgccgacatcgccctgggcagc
gcgcaactgcgcatcggcgtactgccgggcagcctgcgccatccgttcgccgacgcgtcg
gtgcagcggttccgttgcccgtga

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