KEGG   Lysobacter yananisis: RDV84_19480
Entry
RDV84_19480       CDS       T09342                                 
Symbol
tssI
Name
(GenBank) type VI secretion system tip protein TssI/VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
lya  Lysobacter yananisis
Pathway
lya03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lya00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RDV84_19480 (tssI)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lya02044]
    RDV84_19480 (tssI)
Secretion system [BR:lya02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   RDV84_19480 (tssI)
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 DUF2345
Other DBs
NCBI-ProteinID: WMT02125
UniProt: A0ABY9P7X2
LinkDB
Position
complement(4646090..4648030)
AA seq 646 aa
MAHAITLQSPLGDKLRFARMRAREQLGRLYTFELEAISRSPALDLKAMLGMAMSVKVTTP
KGYVRHYHGIVSEVEQTGFEYIKDLRYAVYALVLVPKPWLLTQRRDCRIFKNKSVPELVR
LLLSEAGYTDVKLSLTGSYKAREYCVQYRESDFDFISRLMEQEGIYYYFTHTASTHTMVL
ADALGAHSANAPFARVPYCPPGQKGSRMKDSITDWNLGRSAHSKRVRLNDYDYLKPRASL
QVAEEPAEACGGSVGELDVFDYPGAYEDLAVGRRYAQVRAEALNVPQARFSGQTDACGLA
VGALFKLKDFPLAEYNQEYLVVQAETVLVEVDYVSGESATCEPYFCTFSALRSRQPFRTA
QTTPWPRIAGLQTAVVHGKTPEDIEVDQYGRVEVDFFWSPPGKRRADCSCPVRVASYWAG
RRWGAVHIPRVGQEVVVSFLEGNPDRPLIIGSVYNADHMPPYPLPAQRTRSGVRSRSHPR
GGPEDYNEISFEDRKGKEELLLHAQRDMRHESENDHLVDTKRDETGEIGRNREWTVGRDD
TLKVGRKLRIEAGNEIELVTGAARLVMKRSGEISISGTRLTFDARIGFNVVAGAAVDIKS
GTAFTVMANGAVMVQSNAVATVRANATLLLQATGPAILKGSPPLLA
NT seq 1941 nt   +upstreamnt  +downstreamnt
atggcccacgccatcaccttgcagtccccgctgggcgacaagctgcgcttcgcccgcatg
cgcgcgcgcgagcagctcgggcgcctctataccttcgagctggaagcgatcagccgctcg
ccggcgctggacctcaaggcgatgctgggcatggcgatgtcggtcaaagtgaccacgccc
aagggctacgtgcgccattaccacggcatcgtcagcgaggtcgagcagaccggtttcgaa
tacatcaaggacttgcgctacgccgtctatgcgctggtgctggtgcccaagccctggctg
ctgacccaacgccgcgactgccgcatcttcaagaacaagagcgtgcccgagctggtccgg
ctgctgctgtcggaggccggctacaccgacgtcaagctcagcctcaccggcagctacaag
gcgcgcgagtactgcgtgcagtaccgcgagagcgacttcgacttcatcagccggctgatg
gagcaggagggcatctactactacttcacccacaccgccagcacccacaccatggtcctg
gccgacgcgctcggcgcgcacagcgccaacgcgccgttcgcgcgggtgccgtactgcccg
ccgggacagaagggcagccggatgaaggattcgatcaccgactggaacctgggccgcagc
gcgcacagcaagcgcgtgcgcctgaacgactacgactacctcaagccgcgcgcttcgctg
caggtcgccgaggagccggccgaggcctgcggcggcagcgtcggcgagctcgacgtgttc
gactatcccggcgcctacgaagacctcgcggtcggccggcgctacgcccaggtgcgcgcg
gaagcgctgaacgtaccgcaggcgcggttcagcggacagaccgacgcctgcggtctggcg
gtcggcgcgctgttcaagctcaaggattttccgctggccgagtacaaccaggaatacctg
gtggtgcaggccgagaccgtactggtcgaggtcgactacgtatccggcgaaagcgccacc
tgcgagccgtacttctgcacgttctcggccttgcgcagccgccagccgttccgcaccgcg
cagaccacgccgtggccgcgcatcgccgggttgcagaccgcggtggtgcacggcaagacg
ccggaggacatcgaggtcgaccagtacggccgggtcgaggtggacttcttctggagcccg
ccgggcaagcggcgcgcggactgctcctgtccggtgcgggtggcctcgtattgggccggg
cggcgctggggcgcggtgcacatcccgcgcgtcggccaggaagtggtggtgagcttcctg
gaaggcaatccggaccggccgctgatcatcggcagcgtctacaacgccgaccatatgccg
ccgtatccgctgccggcgcagcgcacccgcagcggcgtgcgcagccgcagccatccgcgc
ggcgggccggaggactacaacgaaatcagcttcgaggaccgcaagggcaaggaagaactg
ctgctgcacgcgcagcgcgacatgcgccacgaatccgagaacgaccacctggtcgacacc
aagcgcgacgagaccggcgagatcggccgcaaccgcgaatggaccgtcggccgcgacgac
accctcaaggtcggccgcaagctgcgcatcgaggccggcaacgagatcgagctggtcacc
ggcgcggcgcggctggtgatgaagcgcagcggcgagatatcgatcagcggcacccgtttg
accttcgacgcgcggatcggcttcaacgtggtcgccggcgccgcggtcgacatcaagagc
ggcacggcgttcacggtgatggccaacggcgcggtgatggtgcagtccaacgcggtcgcc
acggtgcgcgccaacgccaccttgctgctgcaggccaccggcccggccatcctcaagggc
tcgccgcccttgctggcatga

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