KEGG   Lysobacter yananisis: RDV84_19500
Entry
RDV84_19500       CDS       T09342                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
lya  Lysobacter yananisis
Brite
KEGG Orthology (KO) [BR:lya00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lya02044]
    RDV84_19500 (tssF)
Secretion system [BR:lya02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   RDV84_19500 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: WMT02129
UniProt: A0ABY9P559
LinkDB
Position
complement(4653020..4654900)
AA seq 626 aa
MDPRLLHHYNRELQHLREMGAEFARDYPKVAGRLGMSGIECADPYVERLLEGFAFMAARV
QLELEAQQPVFAAHLLEMLYPHFLAPLPSMAVVQLHPEAGEGIDPAGHHLPRDTALHSLL
GHGERTPCEYRTAHEVVLYPLRLTDAAYLASPAALAAIGIAADAGVKAGLRLSFAVEPGL
SVDMLNLDRLPLFIAGADGQSGCLYEQLHAHATGFVVRAAAGPNGSYLSRTFGPERIGEV
GFDDAQALLPRSERSFSGYRLLQEYFACPERFLFAEFSGLSELLPRASCLGFEIVVLFDR
VAERLDNAVGADNFRLYCTPAINLFPKRGDRIHLRQGVSEHHLLADRTRPMDFEVYSVAQ
VEGYGDANEPLQRFEPFYAAQGRSWHERRSAFYALRRHPRRLSQGQKHNGARSSYVGSET
FIALVDGEQAPYAHDLRQLGLQMLCTNRDLPLHMPVGKASTDFLLDDAAAIGAARCVAGP
TRPRAAVAAGDSRWRLISHLQLNYLSLLDDGEDGASAIREMLTLYHDPHDSAARRQVEGI
RRVASRPIVRRLPLPGPATYGRGLEITLTCDDAAFEGQGAYLLASVLRHFFARQASMNSF
TETVLRTLERNEVDRWPARLGNRPIL
NT seq 1881 nt   +upstreamnt  +downstreamnt
atggacccgcgcctgctccatcactacaaccgcgagctgcagcacctgcgcgagatgggc
gcggagttcgcccgcgactaccccaaggtcgccgggcgcctgggcatgagcggcatcgag
tgcgccgacccgtacgtcgagcgcctgctggaaggcttcgcgttcatggccgcgcgcgtg
cagctggagctggaagcgcagcagccggtgttcgccgcgcacctgctggagatgctgtac
ccgcattttctcgcgccgctgccgtcgatggcggtggtgcagttgcatcccgaggcgggc
gagggcatcgacccggccggccaccacctgccgcgcgataccgcgctgcactcgctgctc
ggccacggcgagcgcacgccgtgcgaataccgcaccgcgcacgaggtggtgctgtatccg
ctgcgcctgaccgatgcggcctatctggcctcgccggcggcgctggcggcgataggcatc
gccgccgacgccggggtcaaggccggcctgcgcctgagtttcgcggtcgagcccgggctc
agcgtggacatgctcaacctggaccggctgccgctgttcatcgccggcgccgacggccag
tcgggctgcctgtacgaacaactgcacgcgcacgcgaccggcttcgtggtgcgcgccgcg
gccggccccaacggcagctacctcagccgcacgttcggacccgagcgcatcggcgaggtc
ggcttcgacgatgcgcaggccttgctgccgcgcagcgagcgctcgttcagcggctatcgg
ctgctgcaggaatatttcgcctgtccggagcggttcctgttcgccgaattctccggcctg
tccgagctgttgccgcgcgcgtcctgcctggggttcgagatcgtggtgctgttcgaccgc
gtcgccgagcggctcgacaacgcggtcggcgccgacaacttccgcctgtactgcaccccg
gcgatcaacctgttccccaagcgcggcgaccgcatccacctgcgccagggcgtgtccgag
caccacctgctcgccgaccgcacccggccgatggatttcgaggtctacagcgtcgcccag
gtcgagggctacggcgacgccaacgagccgttgcagcgtttcgagccgttctacgccgcg
caggggcgcagctggcacgagcggcgctcggcgttctatgcgctgcgccggcatccgcgc
cggctgtcgcaggggcagaagcacaacggcgcgcgttccagctacgtcggcagcgagacc
ttcatcgccctggtcgacggcgagcaggcgccgtacgcgcacgatctgcgccagctcggc
ctgcagatgctgtgcaccaaccgcgacctgccgctgcacatgccggtcggcaaggccagc
accgatttcctgctcgacgacgccgccgcgatcggcgcggcgcgctgcgtcgccgggccg
acccggccgcgcgccgcggtcgccgccggcgattcgcgctggcgcctgatcagccacctg
cagctcaactacctgtcgctgctcgacgacggcgaggacggcgccagcgcgatccgcgag
atgctgaccctgtaccacgacccgcacgacagcgccgcgcggcgccaggtcgaaggcatc
cgccgggtcgcctcgcgcccgatcgtgcgccggctgccgctgccggggccggccacgtac
ggccgcggactggagatcaccctgacctgcgacgacgccgccttcgaaggccagggcgcg
tacctgctggcgtcggtgctgcggcatttcttcgcccgccaggcatcgatgaattccttc
accgagaccgtgctgcgcacgctcgaacgcaacgaggtggaccgatggcccgcaaggctc
ggaaaccgaccgatcctgtag

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