KEGG   Lysobacter yananisis: RDV84_19520
Entry
RDV84_19520       CDS       T09342                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
lya  Lysobacter yananisis
Brite
KEGG Orthology (KO) [BR:lya00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lya02044]
    RDV84_19520 (tssC)
Secretion system [BR:lya02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   RDV84_19520 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 BMFP
Other DBs
NCBI-ProteinID: WMT02133
UniProt: A0ABY9P4Z9
LinkDB
Position
complement(4656916..4658430)
AA seq 504 aa
MATTQKAVATAEALETAPSVDAPSINDFSALLAREFRPRNERAGEEVRSAVRTLAEQVLE
RSDIISADVTQTLSAYIAEIDRKLSEQLNLVMHNAQFQKMEGAWRGLHYLVTNTETDTLL
KIRVLNVSKAELGKNLKRFKGVAWDQSPVFKKVYEEEYGQLGGEPYGCLIGDYYFDHSPQ
DVEMLRGIGQIAAAAHAPFIGAASPSLMGMESWGELSNPRDLAKIFTTPDYAAWRSLRGS
DDAKYLALAMPRTLSRLPYGARTEPVEEFDFEEDTEGADSSRYTWQNAAYAMAVNVNRSF
KLYGWCTRIRGVESGGAVEGLPAHTFPTDDGGVDMKCPTEIAITDRRSAELDKMGLMPLV
HRKNSDMAAFIGAQSLGRPEEYDDPDATANAALSARLPYMFACSRFAHYLKCIARDKIGS
FSTREQVQSWLTDWVMNYVDGDPANSSEEAKARKPLAAAEVQVEEVEGNPGYYTSKFFLR
PHYQLEGLTVSLRLVSRLPSAQAK
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggccactacccagaaagccgtcgccaccgccgaagcgctcgaaaccgcgccgtcggta
gacgcgccgtcgatcaacgatttctccgcgctgctcgcgcgcgagttccgcccgcgcaac
gagcgcgccggcgaggaagtccgctcggcggtgcgcacgctcgccgagcaggtgctcgaa
cgcagcgacatcatcagcgccgacgtcacccagaccctgagcgcctacatcgccgagatc
gaccgcaagctcagcgagcagctcaaccttgtgatgcacaacgcccagttccagaagatg
gaaggcgcctggcgcggcctgcattacctggtcaccaacaccgagaccgacacgctgctg
aagatccgcgtgctcaacgtctccaaggccgaactcggcaagaacctcaagcgcttcaag
ggcgtcgcctgggaccagagcccggtgttcaagaaggtctacgaagaagagtacggccag
ctcggcggcgagccttacggctgtctgatcggcgattactacttcgaccacagtccgcag
gacgtggaaatgttgcgcggcatcggccagatcgccgccgccgcgcacgcgccgttcatc
ggcgcggcctcgccgagcctgatgggcatggagagctggggcgagctgtcgaacccgcgc
gacctggccaagatcttcaccaccccggactacgccgcctggcgttcgctgcgcggcagc
gacgacgccaagtacctcgcgctggcgatgccgcgcacgctctcgcgcctgccgtacggc
gcgcgcaccgagccggtcgaggagttcgacttcgaagaggacaccgaaggcgccgattcc
tcgcgctacacctggcagaacgccgcttacgcgatggcggtcaacgtcaaccgttcgttc
aagctctacggctggtgcacgcgcatccgcggcgtcgagtccggcggcgcggtcgaaggc
ctgccggcgcacaccttcccgaccgacgacggcggcgtggacatgaagtgcccgaccgag
atcgcgatcaccgaccgccgctcggccgagctcgacaagatgggcctgatgccgctggtg
caccgcaagaacagcgacatggccgcgttcatcggcgcgcagtcgctgggccggccggag
gagtacgacgaccccgacgccaccgccaacgcggcgttgagcgcgcgcctgccgtacatg
ttcgcgtgctcgcgcttcgcccattacctgaagtgcatcgcgcgcgacaagatcggctcg
ttcagcacccgcgaacaggtgcagagctggctgaccgactgggtcatgaactacgtcgac
ggcgacccggccaactccagcgaggaagccaaggcgcgcaagccgctggccgcggccgag
gtgcaggtggaggaagtcgagggcaacccgggctactacacctccaagttcttcctgcgc
ccgcattaccagctcgaaggcctgaccgtgtcgctgcgcctggtctcccgcctgccgtcc
gcgcaagccaagtaa

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