Lysobacter yananisis: RDV84_20830
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Entry
RDV84_20830 CDS
T09342
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
lya
Lysobacter yananisis
Pathway
lya00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RDV84_20830 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lya01007
]
RDV84_20830 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lya03016
]
RDV84_20830 (lysS)
Enzymes [BR:
lya01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
RDV84_20830 (lysS)
Amino acid related enzymes [BR:
lya01007
]
Aminoacyl-tRNA synthetase
Class II (A)
RDV84_20830 (lysS)
Transfer RNA biogenesis [BR:
lya03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RDV84_20830 (lysS)
Prokaryotic type
Other AARSs
RDV84_20830 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
SSB_1
Motif
Other DBs
NCBI-ProteinID:
WMT02385
LinkDB
All DBs
Position
complement(5052996..5054513)
Genome browser
AA seq
505 aa
AA seq
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MTDETQQPPIDENHLIAERRAKLTALRGEGIAFPNDFRRGDYAGDLHALYADADLWTQEA
LDAKAHRVAVAGRILLKRVMGKASFVQIQDESGRLQLFLQANALGDTYDKFKGWDVGDIV
AAEGALTRTKTGELSVKAESLRLLTKALRPLPDKFHGLADVEQRYRQRYVDLIVSPDSRE
VFVKRSKIIRAMRAWLDARRFLEVETPMMHYIPGGATAKPFTTHHNALDLQLYLRVAPEL
YLKRLTVGGLERVYEINRNFRNEGVSTRHNPEFTMLELYEAYATYTEIMDLTEAVIRHAA
NDVLRTTQVEWDGNAIDLGPAFRRWSMTDAVLEHNPQIKREELRDLAAMRAHCARLKVAV
KPSYGWGKLLLEIFEKTVEHTLIQPTFITDHPVEVSPLARANDLDPELTDRFELFVGGKE
LANGFSELNDPEDQAARFQAQVAQKDGGDDEAMHFDADYIRALEVGLPPTGGLGIGIDRL
VMLLTGSSSIRDVLLFPYMRPEAGA
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgaaacccagcagccgcccatcgacgagaaccacctgatcgccgagcgccgg
gcgaaactcacggcgttgcgcggggagggcatcgcgttcccgaacgatttccgtcgcggc
gactacgccggcgacctgcacgcgctctacgccgatgccgacctgtggacccaggaggcg
ctcgacgccaaggcgcatcgcgtcgcggtggccggccgcatcctgctcaagcgggtcatg
ggcaaggccagcttcgtccagatccaggacgagtccggccgcctgcagctgttcctgcag
gccaacgcgctcggcgacacctacgacaagttcaagggctgggacgtgggcgacatcgtc
gccgccgaaggcgcgctgacccggaccaagaccggcgaactgtcggtcaaggccgaatcg
ctgcgcctgctgaccaaggcgctgcgcccgctgccggacaagttccacggcctggccgac
gtcgagcagcgctaccgccagcgctacgtcgacctgatcgtctcgcccgattcgcgcgag
gtgttcgtcaagcgctccaagatcatccgcgcgatgcgcgcctggctcgacgcgcgccgc
ttcctggaagtggaaacgccgatgatgcattacatccccggcggcgccacggccaagccg
ttcacgacccaccacaacgcgctcgacctgcagctgtacctgcgcgtggcgccggagctg
tacctcaagcgcctgaccgtcggcggcctggagcgggtctacgagatcaaccgcaacttc
cgcaacgagggcgtgtcgacccggcacaaccccgaattcaccatgctcgagctgtacgag
gcctacgccacctacaccgagatcatggacctgaccgaggcggtgatccgccacgcggcg
aacgacgtgctgcgcacgacccaggtcgagtgggacggcaacgccatcgacctgggcccg
gcgttccgccgctggtcgatgaccgacgcggtgctggagcacaacccgcagatcaagcgc
gaggaactgcgcgacctggccgccatgcgcgcccactgcgcgcgcctgaaggtcgcggtc
aagccgtcctacggctggggcaagctgctgctggagatcttcgagaagaccgtcgagcac
accctgatccagccgactttcatcaccgaccacccggtggaagtcagcccgctggcgcgc
gccaacgacctggacccggaactgaccgaccgcttcgaactgttcgtcggcggcaaggaa
ctggcgaacggcttctccgagctcaacgaccccgaggaccaggccgcgcgcttccaggcg
caggtggcgcagaaggacggcggcgacgacgaggccatgcacttcgacgccgactacatt
cgggcgctcgaggtggggttgccgccgaccggcggcctcggcatcggcatcgaccggctg
gtgatgctgctgaccggttcgtcctcgatccgcgacgtgctgctgttcccgtacatgcgt
cccgaagccggcgcctga
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