Lysobacter yananisis: RDV84_21215
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Entry
RDV84_21215 CDS
T09342
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
lya
Lysobacter yananisis
Brite
KEGG Orthology (KO) [BR:
lya00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lya02000
]
RDV84_21215
Transporters [BR:
lya02000
]
Other transporters
Pores ion channels [TC:
1
]
RDV84_21215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WMT02454
UniProt:
A0ABY9P7X1
LinkDB
All DBs
Position
complement(5154211..5157009)
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AA seq
932 aa
AA seq
DB search
MQAAFRPQRRPLSVFLALALSALAAPALAADLAAADAAADAAAADADEPQADRPATTLDQ
VVVTGSRIPRASLEGPSPVTVISAEQIDKQGFRSAFDALAALSQNTGVVQGEDFGNTFTP
AANVINLRGLGPNHTLVLINGRRQADYPLAYEGSVNVVNLANIPSALIERIEVLGGGASA
VYGSDAVAGVVNFILKKKFDGTQVNVRAGGTEHGGGQNQRLQVVSGYSNDRFDAVYGVEL
SHRQAIWGDQRDFMDSLLDNPTGEPINPTQVGFRRNARTNGFIDPGAACGGLSGLYHGST
FRANNPRQGWYCGSNEAAPAFWTVQTQKKNADAYGLLTWHLSERTELFADVQLGIASIEN
NTRAPSWTSDNNYFLNQASGLNEIWYRRIAPEEIGSAHANNNRFLERSWAFSVGARGALG
DSDWNYELAYNHGRNENRTKRRQFLAGINEFFLGPRLGTTAAGIGIYNPDPSRLYTALTP
ADYQRLTGFYEGVNAAWIQNLSFSVNGNLFDLPAGSVGFAGVIEAGTQGYSNRPDPRLGD
GTFWNTSAGSRSSGDRDRYAIGAELSIPIFSTLTASAAARYDEFRFAGRKSGKATWNAGL
EYRPTDSLLVRATAATSFRAPDMNYIFAAETRGYNPGMTDYWRCRTAGQAYDDCDFSGLA
IDYTSNGNTGLKPENGKSYGVGVVWSPSQNFDLSVDYYSIRLEDEVTNLSSSRILREEAD
CRLGRTIGGEPRDINSANCREVLARVIRNPSDAPVQPDQVRRVLVNAINAASERTDGVDV
KGNLRWSAGRFGDFAANVAYTLVIKHDYQQFADDPRIDLRNTLDPLEAGDWRSKVNTGLS
WSIGAWTTNLSAYRYGSLPKSDGSGRYGPYTKYNGSVSYKFGDRSTLSLIVNNLRDSDPP
QDRNNGGWPFYPVGNYDPYGRQFWLEYDVRFD
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccgcgttccggccgcagcgccgcccgctgtccgttttcctcgcgctggcgctg
tcggcgctggccgcgcccgccctggccgccgaccttgccgccgccgatgcagcggccgat
gcagcggccgccgacgccgacgagccgcaggccgaccgtccggccaccaccctcgatcaa
gtcgtggtgaccggctcgcgcatcccgcgcgcgagcctggaagggccgtcgccggtcacc
gtgatcagcgccgagcagatcgacaagcaaggcttccgcagcgccttcgacgcgctcgcc
gcgctgagccagaacaccggcgtggtccagggcgaggacttcggcaacaccttcactccg
gccgccaacgtcatcaacctgcgcggcctcggccccaaccacaccctggtgctgatcaac
ggccgtcgccaggccgactacccgctggcctacgaaggctcggtcaacgtcgtcaacctc
gccaacattcccagcgcattgatcgaacgcatcgaagtgctcggcggcggcgcctcggcg
gtgtacggctccgacgcggtcgccggcgtggtcaacttcatcctcaagaagaagttcgac
ggcacccaggtcaacgtgcgcgccggcggcaccgagcacggcggcggccagaaccagcgt
ctgcaggtggtcagcggttactccaacgatcgtttcgacgccgtctacggcgtcgagctc
tcgcaccgccaggcgatttggggcgaccagcgcgacttcatggattcgctgctcgacaac
ccgaccggcgagcccatcaacccgacccaggtcggcttccgccgcaacgcgcgcaccaac
ggcttcatcgatccgggcgcggcctgcggcggtttgtccggcctgtaccacggctcgacc
ttccgcgccaacaatccgcgccagggctggtactgcggcagcaacgaggccgcgccggcg
ttctggaccgtgcagacgcagaagaagaacgccgacgcctacggcctgctgacctggcac
ctgagcgagcgcaccgagttgttcgccgacgtgcagctgggcatcgccagcatcgagaac
aacacccgcgcgccgagctggacctcggacaacaactacttcctcaaccaggccagcggc
ctcaacgaaatctggtaccggcgcatcgcgccggaagagatcggctcggcgcacgccaac
aacaaccgcttcctggagcgctcctgggcgttctcggtcggcgcgcgcggcgcgctcggc
gacagcgactggaactacgaactggcctacaaccacggccgcaacgagaaccggaccaag
cgccgccagttcctggccggcatcaacgagttcttcctcggcccgcgcctgggcaccacc
gcggccggcatcggcatctacaaccccgatccgtcgcgcctgtacaccgcgctgacgccg
gccgactaccagcgcctgaccggcttctacgaaggcgtcaacgccgcctggatccagaac
ctgagcttcagcgtcaacggcaatctgttcgacctgccggccggctcggtcggtttcgcc
ggcgtgatcgaagccggcacccagggttacagcaaccgccccgatccgcgcctgggcgac
ggcacgttctggaacaccagcgccggctcgcgttccagcggcgaccgcgaccgctacgcc
atcggcgccgagctcagcatcccgatcttcagcacgctgaccgcgtcggccgcggcgcgc
tacgacgagttccgcttcgccgggcgcaagtcgggcaaggcgacctggaacgccggcctg
gaataccgcccgaccgacagcctgctggtgcgcgcgaccgccgcgaccagcttccgcgcg
ccggacatgaactacatcttcgccgccgagacccgcggctataaccccggcatgaccgac
tactggcgctgccgcaccgccggccaggcctacgacgactgcgatttctccggcctggcg
atcgactacaccagcaacggcaacaccgggctcaagccggagaacggcaagtcctacggc
gtcggcgtggtctggtcgccgtcgcagaacttcgacctgtcggtggactactactcgatc
cggttggaagacgaagtcaccaacctcagcagcagccggatcctgcgcgaagaggccgac
tgccgcctcggccgcaccatcggcggcgagccgcgcgacatcaattcggccaactgccgc
gaagtgctggcgcgggtgatccgcaacccgtccgacgcgccggtgcagcccgaccaggtg
cggcgggtgctggtcaacgcgatcaacgccgcgtccgaacgcaccgacggcgtcgacgtg
aagggcaacctgcgctggagcgcgggccgcttcggcgacttcgcggcgaacgtggcctac
accctggtgatcaagcacgactaccagcagttcgccgacgacccgcgcatcgacctgcgc
aacaccctcgacccgctggaagccggcgactggcgcagcaaggtcaacaccggcctgagc
tggtcgatcggcgcgtggaccaccaacctcagcgcctaccgctacggcagcctgcccaag
agcgacggcagcggccgctacggcccgtacaccaagtacaacggcagcgtgtcgtacaag
ttcggcgaccgctccacgctgtcgctgatcgtcaacaacctgcgcgattccgatccgccg
caggaccgcaacaacggcggctggccgttctatccggtcggcaactacgatccgtacggg
cgccagttctggctggagtacgacgtgcgcttcgactga
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