Lysobacter yananisis: RDV84_21715
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Entry
RDV84_21715 CDS
T09342
Name
(GenBank) putative Ig domain-containing protein
Organism
lya
Lysobacter yananisis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Autotransporter
Big_9
Y_Y_Y
Cadherin_5
SprB
Motif
Other DBs
NCBI-ProteinID:
WMT02549
LinkDB
All DBs
Position
complement(5319148..5325864)
Genome browser
AA seq
2238 aa
AA seq
DB search
MNNMQQQSAQSAGVSHASYWGHSTAARAWRRGLAAILIVLAGLWSFAAVAAPSIRCPVMT
LAVANGGTSILDADMCDGGPPPGGFGIGVLMTPPQHGTVTVNQSTDKVTYTHNGGATLTD
TFSFGDGVGGEVTVNVTIAAGTSPITVSPASISPQLGVAYSQSMSATGGVAPYTYVLNGG
AAVLPTGLSFASGTFSGTVRQRGNFPVQVTVTDSTAPTPLTTVKSYTIAIPNTQHDFAPA
TLPTLYRTASYNIALTGSGGVGPYNYAIETGSLPAGLSISGGAIVGTPTASGAYSVTIKS
TDSSLPGPGVPAVAFRIRTYTGTVLEPPTIAVNPATAANGTVAVAYSQAFSATGGTAPYT
FQIVPGGQLPAGVTLTGGTLSGTPTQAGTFNFSVRATDANGFFNSRAYTIVVAPPSIAVD
PNTLPDATVGAGYSQTFSATGGIGGYSFVRTGTLPPGMNLTGAVLSGTPTAGGSFTFTIT
ATDNGSTGTGAPFSGARTYTLVVQPPTINLPATSLANATQGLAYTATLNAASQGTAPYKY
AVTAGDLPPGLGLDLNTGVISGTPSTAGTFNFAVTATDSSTGTGPYNSAPRGYVLQVINI
PPVANAVSAAVAYNSGANPITLNITGGVATSVAIGTAPLHGTAIASGLNVTYQPTPGYAG
SDSFTYTATNSAGTSAPATVTIAVGNPTITVTASGPLTAQIGVAYTQTFTWNGGAQPFSQ
YQVTNLPAGLAVTGNTANSVTVAGTPTQAGAVTLTASARDSSTGNGPFTIAQSFNLSVSA
PTLTLTPAAGTLSATYGAAYSQSYVAGGGTAPYKYRISAGGLPTGLELDEDTGVLSGVPS
VTGLYTFSVRATDNSTGTGGPFSRTQNYVMQVAAPSINLAPTTLPAGAQVGAAYTASVSA
TGGIGPYTYAIPPGSAPPGLSMSSDGTLSGTPTAGGLFNFMVIATDAHGQTGNRPYIFNV
AVPTITVSPATLADGNVAQLYSQTITASGGTVGSGYQFSAPPGDLPPGLSLSTGGVLSGT
PTAGGSFTFTVTATDSSTGSGPYSGTRTYTVAIGASTILLPTTSLANATVTSPYTATLNP
ATGGTAPYTYAVTGGNLPASVLLNANGTLSGTPTAPGTYTFSVVATDSSGGTGPYSSAPQ
SYTLVVNDIVPVAHPVSVTVGYGSSANPVTLNITGGIPASVAIGAAATHGTAVATGTSIT
YQPVAGYSGPDSFTYTATNSAGTSTPATVTVSVSDPTITIATSGPLTGQVGVAYTQTFTW
SGGAAPYGNFNASNLPTGLTVTATGTDSLTVSGTPTAAGTFNASVSARDSGTGNGPFTVG
QLFAFAIGAPTLSMTPAPGSLPMNYGVASSINFAASGGTAPYTFSLAAGSLPVGVSLSSA
GVLSGTPTVPGNYNVTVRATDSSTGTGAPFRIDQSYTIVVATPSIAIDPASIPNGTAAVA
YNQTFSATGGVAPYTFSLTAGALPVGMSLSSAGVLSGTPRSDGNFSLTLQATDANGQTAS
KVYTFAIAPATLTISPATLPGGVVGTAYSQGLSSSGGIAPYTYALASGALPSGIALSSAG
AISGTPTLAGNYSFAIRSTDDAGYNTTVNYSIAVADAVPVAVDDSASTQSNQAVTVNVIA
NDTGIITSVAVVSAPAHGTATPSGTSIVYTPASNYFGSDSFTYTATGPGGTSAPATVTMT
VNALPVPVGQPQNVTTLSTQPVTIDAATGATGAPFTGVTLLAPPSSGTATVQGTQILYTP
AADTAGAIALNYTLNNPFGASAPITSTITVNPVPVATPKRVRTIAGATVKVELTQDARGG
PFTGAALVSLTPASSGTATVSASNGGYTLSYTPQIGYSGLTVATFTLSNAYATSAPATVE
IEVAPRSDPSKDAEVLGILNAQAEAARRFANAQIGNFQKRMEGLHDGGTGGSRFDNGLSF
SVDPRCREGARRTPGSDCRDPDLGDEQAGVDGKPRVEGTGPQYGIWTGGTIESGNRDGRG
GGSGGLDFKTSGVSLGADYRVRRDFAFGGGVGYGRDDTDVGTRGSRSKGESYSAVLYASY
HPGESFFLDGLLGYQWLSFDSRRYVTDTGGMVRGSRDGSQWFASVSTGLEYQRDKLRISP
YARLDVARATLDGYTESGDAQYALNYRDLDVDTTTTSLGLRLDYRHPVRWGTFSPQLRLE
YQHDFQDASYAIMSYADMVGGPFYRARLQGLDRNRFVFGLGAVLQTERDWALRLEYRGLF
GSGNDDDNSFMINIEKKY
NT seq
6717 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacatgcaacagcagtcggcgcagtctgcgggcgtttcgcacgcctcgtactgg
ggacactcgaccgcagccagggcctggcggcgcggtctggcggcgatccttatcgtcctg
gcgggtctatggtcgttcgccgcggtcgcggcgccgtcgatccgctgcccggtcatgacc
ctggcggtggccaacggcggcaccagcatcctcgacgccgacatgtgcgacggcggcccg
ccgccgggcggcttcggcatcggcgtgctgatgaccccgccgcagcacggcaccgtcacg
gtcaaccagagcaccgacaaggtcacctacacccataacggcggcgcgaccctcaccgac
accttcagcttcggcgacggcgtcggcggcgaggtcaccgtcaacgtgaccatcgctgcg
ggcaccagtccgatcacggtcagcccggcctcgatctcgccccagctcggcgtcgcctac
agtcaatcgatgagcgccaccggcggggtcgcgccgtacacctatgtgctcaacggcggc
gccgccgtgctgccgaccgggctgagcttcgcttccgggacgttctccggcacggtccgc
cagcgcggcaatttcccggtgcaggtcaccgtcaccgattcgaccgcgccgacgccgctg
accacggtcaagtcgtacaccatcgcgatccccaacacccagcacgatttcgccccggcc
accctgccgaccctgtaccgcaccgccagctacaacatcgccctgaccggcagcggcggc
gtcggcccgtacaactacgcgatcgagaccggctcgctgccggccggcctgagcatcagc
ggcggcgccatcgtcggcaccccgaccgcgtcgggcgcgtattcggtcacgatcaagtcc
accgacagcagcctgcccggaccgggcgtgccggcggtggcgttccgcatccgcacctac
accggcaccgtgctggaaccgccgaccatcgcggtcaacccggccacggccgccaacggc
accgtcgccgtcgcctacagccaggccttcagcgccaccggcggcaccgcgccgtacacc
ttccagatcgtgcccggcggccagctgccggccggcgtgaccttgaccggcggcaccctc
agcggcaccccgacccaggccggcaccttcaacttcagcgtgcgcgcgaccgacgccaac
ggcttcttcaacagccgcgcctacaccatcgtggtggcgccgccgtcgatcgcggtcgat
cccaatacgctgcccgacgccaccgtcggcgcgggctacagccagaccttcagcgccacc
ggcggcatcggcggctacagcttcgtccgcaccggcacgctgccgccggggatgaacctg
accggcgcggtcctgtccggcacgccgaccgcgggcggcagcttcaccttcaccatcacg
gcgaccgacaacggcagcaccggcaccggcgcaccgttcagcggcgcgcgcacctacacc
ctggtggtgcagccgccgaccatcaacctgccggcgacctccctggccaacgccacccag
ggcctggcgtataccgccacgctcaatgcggccagccaaggcaccgcgccgtacaagtac
gcggtgaccgccggcgatctgccgccgggcctgggactcgacctcaataccggcgtgatc
agcggtaccccgagcacggccggcaccttcaacttcgccgtgaccgccaccgacagcagc
accggcaccgggccgtacaactcggcgccgcgcggctacgtgctgcaggtgatcaatatt
ccgccggtcgccaatgcggtctcggcggcggtcgcctacaacagcggcgccaatccgatc
acgctgaacatcaccggcggcgtggcgacctcggtcgcgatcggcaccgcgccgttgcac
ggcaccgccatcgcttcgggcctgaacgtcacttaccagccgaccccggggtatgccggc
agcgacagcttcacctacaccgcaaccaacagcgccggcacctcggcgccggcgacggtg
accatcgcggtcggcaacccgaccatcaccgtgaccgcctcggggccgctgaccgcgcag
atcggcgtggcgtacacccagaccttcacctggaacggcggcgcccagcccttcagccag
taccaggtcaccaacctgccggccggcctcgccgtcaccggcaacaccgccaacagcgtg
accgtggccggcacgccgacccaggccggcgcggtgacgctgaccgcctcggcgcgcgat
tcgagcaccggcaacgggccgttcaccatcgcccagagcttcaacctgagcgtgtcggcg
ccgaccctgaccctgaccccggcggcgggcaccctgagcgcgacctacggcgcggcctat
agccagagctatgtcgccggcggcggcaccgcgccgtacaagtaccggatcagcgcgggc
gggctgccgaccggcctggaactggacgaggacaccggcgtgctttcgggcgtcccgagc
gtgaccggcctgtacaccttctcggtgcgcgccaccgacaactccaccggcaccggcgga
ccgttctcgcgcacccagaactacgtgatgcaagtcgccgcgccgagcatcaacctcgcg
ccgacgaccttgccggccggcgcccaggtcggcgccgcctacaccgccagcgtcagcgct
accggcggtatcgggccgtacacctacgcgattccgcccggcagcgcgccgcccggcctg
agcatgtccagcgatggcaccctcagcggtacgccgaccgcgggcggattgttcaacttc
atggtcatcgccaccgacgcgcacgggcagaccggcaaccgtccctacatcttcaacgtg
gccgtgccgacgatcaccgtgtcgccggcgacgctggcggacggcaacgtcgcccagctc
tacagccagacgatcaccgccagcggcggcaccgtcggcagcggctaccagttctcggcg
ccgccgggcgacctgccgccgggcctgagcctgagcacgggcggcgtgctcagcggcacg
ccgaccgcgggcggcagcttcactttcaccgtcaccgcgaccgattccagcaccggcagc
gggccgtacagcggcacgcgcacctacaccgtcgcgatcggcgcctcgaccatcctgttg
ccgacgacctcgctcgccaacgcgacggtcacctcgccgtacaccgccacgctcaatccc
gcgaccggcggcacggcgccgtacacctacgcggtgaccggcggcaacctgccagccagc
gtgctgttgaacgccaacggcacgctgagcggcacgccgaccgcgccgggcacttacacc
ttcagcgtcgtcgccaccgattccagcggcggcaccggcccctacagctcggcgccgcag
agctacacgctggtggtgaacgacatcgtgccggtggcccatccggtctcggtcacggtc
ggctacggcagcagcgccaatccggtgacgctcaacatcaccggcggcatcccggcctcg
gtcgcgatcggcgccgcggcgacgcacggcaccgcggtcgccaccggtacctcgatcacc
taccagccggtcgcgggctattccggtccggacagcttcacctacaccgcgaccaacagc
gccggtacgtcgacgcccgcgacggtgacggtgagcgtctccgatccgaccatcaccatc
gccacctccgggccgctgaccggccaggtcggcgtggcctacacccagaccttcacctgg
tccggcggcgccgcgccgtacggcaacttcaacgccagcaacctgccgacgggcttgacg
gtgaccgccaccggcaccgacagcctgaccgtgtcgggcacgccgaccgcggccggcacc
ttcaacgcgagcgtcagcgcgcgcgattcgggcaccggcaacgggccgttcaccgtcggc
cagctgttcgcgttcgcgatcggcgcgccgaccctgtcgatgaccccggcgccgggcagc
ctgccaatgaattacggcgtcgccagcagcatcaacttcgccgccagcggcggcaccgcg
ccgtacaccttcagcctcgccgccggctcgctgccggtcggtgtgagcctgagctcggcc
ggcgtgctcagcggtacgccgacggtgccgggcaactacaacgtcaccgtgcgcgcgacc
gattccagcaccggcaccggcgcgccgttccgcatcgaccagagctacaccatcgtcgtc
gccacgccgagcatcgccatcgatccggcgtcgattccgaacggcaccgccgcggtcgcc
tacaaccagaccttcagcgccaccggcggcgtcgcgccgtacacgttctcgctgaccgcc
ggcgcgctgccggtcggcatgagcctgagctcggccggcgtgctgtcgggcaccccgcgc
agcgacggcaacttcagcctgaccctgcaggcgaccgacgccaacggccagaccgcgtcg
aaggtctacaccttcgccatcgctccggcgacgctgaccatttcgccggcgaccctgccg
ggcggcgtggtcggcaccgcctacagccagggcctgagcagcagcggcggcatcgcgccg
tacacctatgcgctggcctccggggcgttgccgtcgggcatcgcgctgagttcggccggc
gcgatcagcggcacgccgacgctggcgggcaactacagcttcgcgatccgctccaccgac
gacgccggctacaacaccacggtcaactacagcatcgccgtcgccgacgcggtgccggtc
gcggtcgacgacagcgccagcacccagtcgaaccaggccgtcaccgtcaacgtgatcgcc
aacgacaccggcatcatcacctcggtggcggtggtctccgcgccggcgcacggcaccgcg
acgccgagcggcaccagcatcgtctacactccggccagcaactacttcggcagcgacagt
ttcacctacaccgcgaccggtccgggcggcacctcggccccggccacggtgacgatgacg
gtcaacgcgctgccggtgccggtgggccagccgcagaacgtcaccacgctgtcgacccag
ccggtcaccatcgacgccgccaccggcgccaccggcgcgccgttcaccggcgtgaccttg
ctggcgccgccgagctcgggcacggcgacggtgcagggcacccagatcctgtacacgccc
gcggccgacaccgccggcgcgatcgccctgaactacaccctcaacaacccgttcggcgcc
tccgccccgatcacctcgaccatcaccgtcaacccggtgccggtggccacgcccaagcgc
gtgcgcaccatcgccggcgccacggtcaaggtcgagctgacccaggacgcgcgcggcggt
ccgttcaccggcgcggccctggtctcgctgaccccggccagctcgggcacggccacggtc
agcgcgtccaacggcggctacacgctcagctacaccccgcagatcggctactccggcttg
accgtggcgaccttcaccttgagcaacgcctacgccacctcggcgccggcgacggtcgag
atcgaagtcgccccgcgcagcgatccgtccaaggacgccgaagtgctgggcatcctcaac
gcccaggccgaggccgcgcgccgcttcgccaacgcccagatcggcaacttccaaaagcgc
atggaaggcctgcacgacggcggcaccggcggctcgcgcttcgacaacggcctgagcttc
tcggtcgacccgcgttgccgcgaaggcgcgcgccgcaccccgggcagcgactgccgcgat
ccggatctcggcgacgagcaggccggcgtggacggcaagccgcgggtggaaggcaccggc
ccgcagtacggcatctggaccggcggcaccatcgaaagcggcaaccgcgacggtcgcggc
ggcggctccggcgggttggacttcaagaccagcggcgtgagcctgggcgccgactaccgc
gtgcgccgcgacttcgccttcggcggcggcgtcggctacggccgcgacgacaccgacgtc
ggcacccgcggcagccgcagcaagggcgagagctacagcgcggtgctgtacgccagctac
caccccggcgagagcttcttcctcgacggcctgctcggctaccagtggttgtcgttcgac
tcgcgccgctatgtcaccgacaccggcggcatggtccgcggcagccgcgacggcagccag
tggttcgcctcggtctcgaccggcctggagtaccagcgcgacaagctgcggatctcgccg
tacgcccgcctggacgtggcccgcgccaccctcgacggctacaccgagagcggcgacgcg
cagtacgcgctgaactaccgcgacctggacgtggacaccaccaccaccagcctcggcctg
cgcctggactaccgccacccggtgcgttggggcacgttctcgccgcagctgcgcttggag
taccagcacgacttccaggatgcgagctacgcgatcatgagctacgccgacatggtcggc
ggcccgttctatcgcgcccgcctgcagggcctggaccgcaaccgcttcgtgttcggcctc
ggcgcggtgctgcagaccgaacgcgactgggcgctgcggctggaataccgcggcctgttc
ggcagcggcaacgacgacgacaacagcttcatgatcaatatcgaaaagaagtactga
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